Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19n24
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase pro... 41 6e-04
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 40 0.001
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 40 0.001
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 37 0.011
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 36 0.018
Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical pr... 35 0.042
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 34 0.098
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 34 0.098
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 34 0.098
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical pr... 28 4.9
L07144-7|AAK21444.2| 646|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF497825-1|AAM18103.1| 670|Caenorhabditis elegans putative Na-H... 28 6.4
AF016447-15|AAR30208.1| 651|Caenorhabditis elegans Na/h exchang... 28 6.4
AF016447-14|AAG24015.2| 670|Caenorhabditis elegans Na/h exchang... 28 6.4
AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical... 28 6.4
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 27 8.5
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +1
Query: 403 HLCTHINVAFARVIDKKIHLDEYQYQTITELCKLK--QENPALKVLISVGGAGEASGFRD 576
H+ THI FAR + I LD Q + E K K + + LKV+ISVGG +
Sbjct: 131 HMLTHIIYLFARPTNGVITLDGEQTRRKFEEMKSKAREASSTLKVMISVGGHDYYKEYSR 190
Query: 577 MVANHASRKIFIKSIKTILR 636
+V+N SR +F+KSI + +
Sbjct: 191 LVSNETSRNVFVKSIVSFFK 210
>Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical
protein C08H9.7 protein.
Length = 447
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 406 LCTHINVAFARVIDKKIHLD-EYQYQTITEL-CKLKQENPALKVLISVGGAGEASGFRDM 579
+ THI FAR + + LD E + E+ K ++ + +KV+ISVGG + F +
Sbjct: 120 MVTHIIYLFARPTNGVMTLDGERTRRKFQEMRSKAREVSSTVKVMISVGGHDHSGAFSAI 179
Query: 580 VANHASRKIFIKSIKTILR 636
++N ASR +FIKSI + ++
Sbjct: 180 MSNEASRSVFIKSIVSFVK 198
>Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical
protein R09D1.14 protein.
Length = 150
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 12/133 (9%)
Frame = +1
Query: 274 SKSQDNVFFIPVTSDIKSNTVVSCYYNTPDNDGKQL---------LPASIDPHLCTHINV 426
SK+ NV P + I S S Y TP + + + + S TH
Sbjct: 11 SKNFLNVSGTPTVTSISSTVAASTYPATPGCNKRIIGYYFATQTSVITSDQVSNLTHAVF 70
Query: 427 AFARVI-DKKIHLD-EYQYQTITELCKL-KQENPALKVLISVGGAGEASGFRDMVANHAS 597
AF + D ++ +D + T L ++ KQ+ P +KV+IS+GG ++ F+ ++++
Sbjct: 71 AFVNITSDGQLQIDGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNNFKPVLSSPDR 130
Query: 598 RKIFIKSIKTILR 636
+K+FI S + L+
Sbjct: 131 KKLFINSTVSFLQ 143
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 406 LCTHINVAFARVIDKKIHLD-EYQYQTITELCK-LKQENPALKVLISVGGAGEASGFRDM 579
+ THI FA + I E Q E+ + +++ + LKV+IS+GG + F +
Sbjct: 133 MLTHIVFLFAFPKNGTITFGGESSSQKFEEMRRNVRKASSTLKVMISIGGQYNSGEFSGL 192
Query: 580 VANHASRKIFIKSIKTILR 636
V+N SR +F+ SI T +R
Sbjct: 193 VSNETSRNLFVNSIATFVR 211
>AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase
protein.
Length = 117
Score = 41.1 bits (92), Expect = 6e-04
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +1
Query: 376 QLLPASIDPHLCTHINVAFA--------RVIDKKIHLDEYQYQTI-TELCKLKQENPALK 528
+ +P P LCTHI AF R D +++ + + + KLK + LK
Sbjct: 10 KFVPEDYTPGLCTHILFAFGWMNADYTVRAYDPADLPNDWAGEGMYRRVNKLKVTDTQLK 69
Query: 529 VLISVGGAGEASG-FRDMVANHASRKIFIKSIKTILR 636
L+S GG + F+ M A+ ASRK+FI S T +R
Sbjct: 70 TLLSFGGCSFGTALFQGMAASSASRKVFIDSATTSVR 106
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 412 THINVAFARVI-DKKIHLD-EYQYQTITELCKL-KQENPALKVLISVGGAGEASGFRDMV 582
TH AF + D + +D + T L ++ KQ+ P +KV+IS+GG ++ F+ ++
Sbjct: 108 THAVFAFVNMTSDGHLQIDGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNNFKPVL 167
Query: 583 ANHASRKIFIKSIKTILR 636
++ +K+FI S + L+
Sbjct: 168 SSPDRKKLFINSTVSFLQ 185
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 505 KQENPALKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTILR 636
++ N LKV+IS+GG + F +V+N SR +F+ SI + ++
Sbjct: 166 RKANSTLKVMISIGGQSNSRSFSRLVSNETSRNVFVNSIVSFVQ 209
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +1
Query: 376 QLLPASIDPHLCTHINVAFA--------RVIDKKIHLDEYQYQTI-TELCKLKQENPALK 528
+ +P P LCTHI AF R D +++ + + + KLK + LK
Sbjct: 71 KFVPEDYTPGLCTHILFAFGWMNADYTVRAYDPADLPNDWAGEGMYRRVNKLKVTDTQLK 130
Query: 529 VLISVGGAGEASG-FRDMVANHASRKIFIKSIKTILR 636
L+S GG + F+ M A+ ASRK+FI S T +R
Sbjct: 131 TLLSFGGWSFGTALFQGMAASSASRKVFIDSAITFVR 167
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 508 QENPALKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTILR 636
Q +P LK+LIS+GG + F ++++ +KIFI SI + L+
Sbjct: 139 QASPKLKMLISIGGPANSDNFLPVISSPDRKKIFINSIVSFLK 181
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 412 THINVAFARVI-DKKIHLD-EYQYQTITELCKL-KQENPALKVLISVGGAGEASGFRDMV 582
TH AF + D + +D + T L ++ KQ+ P +KV+IS+GG ++ F+ +
Sbjct: 106 THAVFAFVNMTSDGHLQIDGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNNFKPGL 165
Query: 583 ANHASRKIFIKSIKTILR 636
++ +K+FI S + L+
Sbjct: 166 SSPDRKKLFINSTVSFLQ 183
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 505 KQENPALKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTIL 633
K EN +K + S+GG G + F +V N ++ FIKSI + L
Sbjct: 147 KTENSTVKFMFSIGGPGHSQNFSPVVRNQEKKRRFIKSIFSFL 189
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 412 THINVAFARVIDKKIHLDEYQYQTITELCKL-KQENPALKVLISVGGAGEASGFRDMVAN 588
TH AF + +L+ Q L K+ KQ+ P +KV+IS+GG ++ F ++ +
Sbjct: 34 THAVFAFVNMTQGG-NLNIINRQRFLSLTKIAKQQTPPVKVMISIGGDDNSNNFYKVLNS 92
Query: 589 HASRKIFIKSIKTILR 636
RK+F+ + + L+
Sbjct: 93 PNRRKVFLNATTSFLQ 108
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 502 LKQENPALKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTIL 633
++ N +K +IS+GG ++ F +V+N R++FI+SI +L
Sbjct: 4 IENSNSIVKKMISIGGCDYSTNFTSVVSNQTIRRVFIESIIALL 47
>Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical
protein T19H5.3 protein.
Length = 407
Score = 36.7 bits (81), Expect = 0.014
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Frame = +1
Query: 196 KASLFIVLGTAVYMSMLTLVYSGQLHSKSQDNVFFIPVTSDIKSNT-VVSCYYNTPDNDG 372
K +F+++G V + + + P+ +DI S T ++ D+ G
Sbjct: 34 KKGIFVLIGICVVFAFANNAMGHPAKENDESSSEIPPIENDIASTTQIIPTVPLLTDSSG 93
Query: 373 KQLLPASIDPHLCTHINVAFARVIDKKIHLDEYQYQTITELC-KLKQENPALKVLISVGG 549
+ P + L + F D + +D + +T ++L K K E+ K L+S+GG
Sbjct: 94 SEKPPDKVTFVLFAADRIGF----DGSVEVD-HSSRTFSKLKEKSKIESSHFKKLLSIGG 148
Query: 550 AGEASGFRDMVANHASRKIFIKSIKTIL 633
++A+ ++ F KSI +IL
Sbjct: 149 RSNTQFLPLVIADPRRKRRFFKSIISIL 176
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 406 LCTHINVAFARVIDKKIHL-DEYQYQTITEL-CKLKQENPALKVLISVGGAGEASGFRDM 579
+ THI FA + I + D+ + E+ ++ + LK++IS+GG + F +
Sbjct: 138 MLTHIIYLFAIPRNGVITIVDDRSLRKFEEMKSNAREASSTLKIMISIGGHYNSRSFSGL 197
Query: 580 VANHASRKIFIKSI 621
V N SR +F+ SI
Sbjct: 198 VFNETSRTVFVNSI 211
>Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical
protein C08H9.12 protein.
Length = 460
Score = 35.1 bits (77), Expect = 0.042
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 505 KQENPALKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTILR 636
++E+ LKV+IS+GG + F +V+ SR +F SI + ++
Sbjct: 168 RKESSTLKVMISIGGQYSSGEFSGLVSKETSRNLFTNSIVSFVQ 211
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 33.9 bits (74), Expect = 0.098
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 412 THINVAFARVIDK-KIHLDEYQYQTITELCKLKQENPALKVLISVGGAGEASGFRDMVAN 588
TH F + D ++ + E + +L K K +N ++IS+GG ++ F ++ +
Sbjct: 86 THAVFRFVSMTDDGQLEMSERAKERFKDL-KSKVKNSMTMLMISIGGFENSNYFSSVLED 144
Query: 589 HASRKIFIKSIKTIL 633
+ IFIKSI + L
Sbjct: 145 EQKKSIFIKSILSFL 159
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 33.9 bits (74), Expect = 0.098
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 412 THINVAFARVIDK-KIHLDEYQYQTITELCKLKQENPALKVLISVGGAGEASGFRDMVAN 588
TH F + D ++ + E + +L K K +N ++IS+GG ++ F ++ +
Sbjct: 86 THAVFRFVSMTDDGQLEMSERAKERFKDL-KSKVKNSMTMLMISIGGFENSNYFSSVLED 144
Query: 589 HASRKIFIKSIKTIL 633
+ IFIKSI + L
Sbjct: 145 EQKKSIFIKSILSFL 159
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 33.9 bits (74), Expect = 0.098
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 523 LKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTILR 636
+K++IS+GG + F ++ + R+IFI SI T L+
Sbjct: 134 VKIMISIGGKENSQNFSPVIESEYRRQIFINSILTFLK 171
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 493 LCKLKQENPALKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTIL 633
+ K E+ LKV+IS+GG S F ++++ R+ I+SI + L
Sbjct: 126 ILKTNAESSTLKVMISIGGMDINSDFSLVISDEKKRRSLIESIVSFL 172
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 31.1 bits (67), Expect = 0.69
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 412 THINVAFARV-IDKKIHLDEYQYQTITELCK-LKQENPALKVLISVGGAGEASGFRDMVA 585
TH+ AF V D + L+ + E K + +P LK+L +VGG + F + A
Sbjct: 55 THLVFAFFVVDSDGSVKLEGDAAKARLEHVKEVASRHPDLKLLYAVGGWENSQYFSVLTA 114
Query: 586 NHASRKIFIKSIKTILR 636
+H+ R I I + +++
Sbjct: 115 DHSRRSILISNFVKVIK 131
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 523 LKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTILR 636
+KV+ S+GG A + +VA+ R +FI SI + ++
Sbjct: 164 VKVMFSIGGHKNAEHYSTVVADSTKRSVFIDSIVSFIK 201
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 514 NPALKVLISVGGAGEASGFRDMVANHASRKIFIKSI 621
N +K++IS+GG + F ++++ K+FI+SI
Sbjct: 152 NSGVKIMISIGGDENSQYFSSVLSDITMCKLFIESI 187
>Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical
protein C08H9.6 protein.
Length = 394
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 499 KLKQENPALKVLISVGGAGEASGFRDMVANHASRKIFIKSIKTIL 633
K K +NP LK+++ + G F ++A + FIKSI + +
Sbjct: 100 KAKMDNPNLKIMVEINGK-----FFSVLAEDEKKNSFIKSISSFV 139
>L07144-7|AAK21444.2| 646|Caenorhabditis elegans Hypothetical
protein R05D3.9 protein.
Length = 646
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 529 VLISVGGAGEASGFRDMVANHASRKIFI 612
+LI +GGAGE F + A +RK +I
Sbjct: 482 ILIQIGGAGEFEPFSKLSARQDARKTYI 509
>AF497825-1|AAM18103.1| 670|Caenorhabditis elegans putative Na-H
exchanger isoform 3 protein.
Length = 670
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 536 FQWEVLEKLLVLETWLPIMLLGKFLSNQSK 625
+ W+ + K+ V+ TWL + L K L N K
Sbjct: 33 WNWDHIHKVYVITTWLLVASLAKILFNLMK 62
>AF016447-15|AAR30208.1| 651|Caenorhabditis elegans Na/h exchanger
protein 3, isoform b protein.
Length = 651
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 536 FQWEVLEKLLVLETWLPIMLLGKFLSNQSK 625
+ W+ + K+ V+ TWL + L K L N K
Sbjct: 14 WNWDHIHKVYVITTWLLVASLAKILFNLMK 43
>AF016447-14|AAG24015.2| 670|Caenorhabditis elegans Na/h exchanger
protein 3, isoform a protein.
Length = 670
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 536 FQWEVLEKLLVLETWLPIMLLGKFLSNQSK 625
+ W+ + K+ V+ TWL + L K L N K
Sbjct: 33 WNWDHIHKVYVITTWLLVASLAKILFNLMK 62
>AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical
protein Y51H7C.2 protein.
Length = 246
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 415 VCTGEGQYWLAIVVCHHYQVCCNNKTLLY 329
+C EG Y LAIVVC ++ N ++Y
Sbjct: 157 LCQKEGDYQLAIVVCKYWGEGQGNGKIMY 185
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 352 NTPDNDGKQL-LPASIDPHLC 411
NTPDNDG Q L A + P++C
Sbjct: 1616 NTPDNDGVQASLRALLTPYIC 1636
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 352 NTPDNDGKQL-LPASIDPHLC 411
NTPDNDG Q L A + P++C
Sbjct: 1616 NTPDNDGVQASLRALLTPYIC 1636
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 352 NTPDNDGKQL-LPASIDPHLC 411
NTPDNDG Q L A + P++C
Sbjct: 1616 NTPDNDGVQASLRALLTPYIC 1636
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,731,094
Number of Sequences: 27780
Number of extensions: 319232
Number of successful extensions: 680
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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