Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19n21
         (304 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   0.83 
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   1.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   1.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   4.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   4.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   4.4  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   5.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   7.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   7.7  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 265 LLRNISNT*SSHHHTL 218
           LL N+ +T   HHHT+
Sbjct: 404 LLNNVYSTPGPHHHTM 419


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 188 YLKSKRPYIHNAIHVLIFPTHC 123
           +LK  RPY+   +H ++   HC
Sbjct: 26  FLKD-RPYVQKQLHCILDRGHC 46


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = -2

Query: 273 VYCFCETFRTPSRLIIIH 220
           ++C  ++ RTPS + +++
Sbjct: 72  IFCAAKSLRTPSNMFVVN 89


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -3

Query: 167 YIHNAI-HVLIFPTHCARAICSDV 99
           Y H+ +   L+ P+H  RA+C  +
Sbjct: 460 YFHSIVLGSLLNPSHMYRAVCGRI 483


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 86  CVLLGHRYRWHVHSALGK 139
           CV     YR H H+ +GK
Sbjct: 102 CVTKDQPYRPHPHNLVGK 119


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 86  CVLLGHRYRWHVHSALGK 139
           CV     YR H H+ +GK
Sbjct: 102 CVTKDQPYRPHPHNLVGK 119


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 188 YLKSKRPYIHNAIHVLIFPTHCARAICSDVPVVRSGCMQTGT 63
           YL  +       I+++IF T     I +   ++++  MQT T
Sbjct: 34  YLSMRMVIPLTIIYMIIFVTGIFGNITTCTVIIKNPAMQTAT 75


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/23 (26%), Positives = 10/23 (43%)
 Frame = +2

Query: 50  NSEEWFRFAYSRCVLLGHRYRWH 118
           +  EWF+ +        + Y WH
Sbjct: 127 DQHEWFQLSLKNIEPYNNYYIWH 149


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/23 (26%), Positives = 10/23 (43%)
 Frame = +2

Query: 50  NSEEWFRFAYSRCVLLGHRYRWH 118
           +  EWF+ +        + Y WH
Sbjct: 127 DQHEWFQLSLKNIEPYNNYYIWH 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,211
Number of Sequences: 438
Number of extensions: 1956
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)