Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19n19
(669 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.61
SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor |Schizo... 29 0.80
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 27 3.2
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 27 3.2
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 27 3.2
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 26 4.3
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 26 5.6
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 26 5.6
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 26 5.6
SPAC1142.07c |vps32|snf7|vacuolar sorting protein Vps32|Schizosa... 25 7.5
SPAC1610.01 ||SPAC17A5.17|conserved fungal protein|Schizosacchar... 25 7.5
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 7.5
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 25 7.5
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 25 7.5
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 25 7.5
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 25 9.9
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 25 9.9
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 25 9.9
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.1 bits (62), Expect = 0.61
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 251 KTSASVQYEETKRDSCSVP-KRKKNIQPL--PIKSKAKSLQNQNIIEAAFPISVPPKIIR 421
KT + + + R++C R +I P+ S SL + ++++ PI + PK++
Sbjct: 259 KTPPRLSFADENRENCRTDIYRSDSIHEYEEPLTSSITSLDSPHVLDENAPIPLLPKVVS 318
Query: 422 KRSPRTRKV 448
PR V
Sbjct: 319 LPDPRFTNV 327
>SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 512
Score = 28.7 bits (61), Expect = 0.80
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 251 KTSASVQYEETK-RDSCSVPKRKKNIQPLPIK 343
KTS ++ EE K R+S S+PK+KK + L K
Sbjct: 470 KTSITISNEERKSRNSESLPKKKKRLSMLSFK 501
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +2
Query: 317 KNIQPLPIKSKAKSLQNQNIIEAAFPIS----VPPKIIRKRSPRTRKVETPRKTPTLRSH 484
K I LPI K+ + +I+ P+S + K+ R++ +K++ +
Sbjct: 851 KRISFLPIHQKSAEAASVDILPKVLPVSKTSDLTDKVNRRQRKNDKKIKNKIQVKLSSIL 910
Query: 485 KGLENKHSKLKEQIVE 532
+ L +++ K K+ I++
Sbjct: 911 EMLRSRYKKFKKPIID 926
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 176 TMVSKLSQNTVI-GPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKS 346
++ S +S N +I P K DD+ ++ +S + +S +VP + KN+ P +S
Sbjct: 161 SLQSSISSNRIIKSPGIKEDDYMHRGRSISSPMIDVEHINSTAVPSKTKNLPEKPKRS 218
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 358 LTKSEHYRSSVSNFRSSKNN*KTFASDS*SRN 453
L KSEH+ SNF+ N+ +S S SR+
Sbjct: 344 LKKSEHFMDFCSNFKGKNNSSSITSSPSKSRH 375
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 271 VRRNKKRFMLCSQEKEKH 324
VRRNKKR L Q KE++
Sbjct: 497 VRRNKKRLALLEQNKEQY 514
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 274 RRNKKRFMLCSQEKEK 321
++NKKR +L SQEKE+
Sbjct: 463 QQNKKRLLLVSQEKER 478
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 25.8 bits (54), Expect = 5.6
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 275 EETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVET 454
+E KR++ VPK + KSK K+ + + SVP + + + + K+ET
Sbjct: 195 KEAKRENAKVPKDVSKKEAKTTKSKEKATKKTS-------SSVPKQSTGENTKKAVKLET 247
Query: 455 P-RKTPTLRSHKGLENKHS 508
P TP + E KHS
Sbjct: 248 PLTSTPPIPPLS--EPKHS 264
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +2
Query: 254 TSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSP 433
T V+ E K S +VP + +P+P + ++ +++ ++ K+I + +P
Sbjct: 305 TGVPVEEESHKATSDAVPPAEAKPEPVPASAAERAPTSESTTVPETIVASTTKVISEPAP 364
Query: 434 RTRKVET 454
R T
Sbjct: 365 RVTTAAT 371
>SPAC1142.07c |vps32|snf7|vacuolar sorting protein
Vps32|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 7.5
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +2
Query: 116 KLDKLQDDVNDHGKTLGDLKTMVS-KLSQNTVIGPE---SKLDDWRVPFKTSASVQYEET 283
K+D++ D + D ++ TM+S + N I + ++LD+ + S + E+
Sbjct: 122 KVDQIMDKIRDQQTISEEISTMISTPVGLNAEIDEDELANELDELQQMELDSKMLGAEKP 181
Query: 284 KRDSCSVPKRKKNIQPLPIKSKAKSLQNQ 370
+ +VP ++ LP SK + L +
Sbjct: 182 PVHTPAVPAVPSQVKDLPSISKPQELDEE 210
>SPAC1610.01 ||SPAC17A5.17|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 217
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 104 HFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKT 256
+FE+K + ++ LG L T++ SQ+ ++ E + W++P++T
Sbjct: 30 YFEEKTVPYKIRSDEESFPLGKLITLLVT-SQSFILFDEEQNSGWKIPYET 79
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 347 KAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRK 463
K K QN N EAA P +P ++ + + R+ + K
Sbjct: 154 KGKKAQNNNESEAAAPPEIPEVRVKTKKEKEREKKEREK 192
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 25.4 bits (53), Expect = 7.5
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +2
Query: 251 KTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRS 430
K + + ++T V K + QP+ KS K L+ Q +A +R+
Sbjct: 4 KDALDIGKDDTNTSEADVSKNETQEQPVLSKSALKRLKRQQEWDAGREKRAE---MRREK 60
Query: 431 PRTRKVETPRK 463
R RK E RK
Sbjct: 61 KRLRKEERKRK 71
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 366 FCKLLAFDLIGNGCMFFFLLGT 301
FC +L ++ C+FFF+LG+
Sbjct: 154 FCNILGRKIVLYICIFFFMLGS 175
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +2
Query: 113 KKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLD 232
+K++KLQD++ D+ G+L ++ + + + E +LD
Sbjct: 126 EKIEKLQDEIQDYMDAAGELNEVLGQ-NMTDINVDEEELD 164
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 260 ASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNI 376
+ + YE+ K+D P+ KN+ P + SL I
Sbjct: 370 SKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKI 408
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +2
Query: 59 ARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLS 196
A++ + L + ++ +LD L DD+ HG + ++ + S +S
Sbjct: 361 AKYLNNLSKSLMFSNAISCRLDSLDDDIRMHGMIMAEVISTYSGVS 406
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 50 LQRARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKL 193
LQ+ L+ I S+K E+K + L DD K + L+T +KL
Sbjct: 78 LQQENKDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKL 125
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,557,147
Number of Sequences: 5004
Number of extensions: 48953
Number of successful extensions: 169
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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