Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19n19
(669 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 29 0.053
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 26 0.28
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 26 0.37
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.0
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 2.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.5
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 22 6.1
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 22 6.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 8.0
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 28.7 bits (61), Expect = 0.053
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 574 NELLFKSNNVDYSYFSYNEEVYY*N 648
N + +NN Y+Y +YN+++YY N
Sbjct: 320 NNYNYNNNNYKYNYNNYNKKLYYKN 344
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 26.2 bits (55), Expect = 0.28
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -3
Query: 424 FSNYFWRNGNWKRCFYNV 371
+SN ++ N N+K+ +YN+
Sbjct: 313 YSNNYYNNNNYKKLYYNI 330
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.8 bits (54), Expect = 0.37
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +2
Query: 338 IKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRK 463
+ K++ + + +A P+ P + +++SP + K TP+K
Sbjct: 752 VAKNKKNVGSMSRNKALLPVIKPANVNKEQSPNSTKETTPKK 793
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 574 NELLFKSNNVDYSYFSYNEEVYY 642
N + NN +Y+ +YN+++YY
Sbjct: 92 NNYKYNYNNNNYNNNNYNKKLYY 114
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 574 NELLFKSNNVDYSYFSYNEEVYY 642
N + NN +Y+ +YN+++YY
Sbjct: 92 NNYKYNYNNNNYNNNNYNKKLYY 114
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 299 SVPKRKKNIQPLP 337
+ P+RKKN +PLP
Sbjct: 25 TTPRRKKNKKPLP 37
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 643 NNTPPRYKKNTNNQHY 596
+N P KN NN HY
Sbjct: 108 SNDPKNQYKNQNNNHY 123
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 595 NNVDYSYFSYNEEVYY 642
NN + +Y +YN+++YY
Sbjct: 95 NNYNNNYNNYNKKLYY 110
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 162 KVLPWSFTSSCNLSSFFSKCLKE 94
K LP S + +CN +KC++E
Sbjct: 113 KCLPTSGSDNCNKIYNLAKCVQE 135
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 162 KVLPWSFTSSCNLSSFFSKCLKE 94
K LP S + +CN +KC++E
Sbjct: 113 KCLPTSGSDNCNKIYNLAKCVQE 135
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 592 SNNVDYSYFSYNEEVYY*N 648
+N +Y+ +YN+++YY N
Sbjct: 101 NNKYNYNNNNYNKKLYYKN 119
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 574 NELLFKSNNVDYSYFSYNEEVYY 642
N+ + +NN Y+Y + +++YY
Sbjct: 87 NKTIHNNNNYKYNYNNNCKKLYY 109
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,777
Number of Sequences: 438
Number of extensions: 3754
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -