Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19m23
(547 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 40 0.001
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 40 0.002
10_06_0088 - 10538037-10539463,10539696-10539789 38 0.005
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 37 0.009
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 36 0.028
01_03_0126 + 12741397-12743022 33 0.15
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 33 0.20
10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758... 32 0.34
07_03_0898 - 22403337-22404950 31 0.45
07_03_0896 + 22373348-22374946 31 0.60
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 30 1.0
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 30 1.4
07_03_0899 + 22421038-22422642 29 1.8
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 29 1.8
07_03_1045 + 23528768-23528879,23528979-23530399 29 3.2
01_01_0870 - 6789903-6792251 29 3.2
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 28 4.2
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 28 4.2
12_01_0303 - 2287875-2289593 27 7.4
12_01_0062 + 530180-532398,533123-533213,533398-533613 27 7.4
11_01_0060 + 453615-454030,454086-455862 27 7.4
03_02_0023 + 5065962-5066079,5066179-5067614 27 7.4
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 40.3 bits (90), Expect = 0.001
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNW 221
D L LS+ + S+ VG + A G +A+ GRK SL+IA + I +A +FA +
Sbjct: 93 DLDLTLSEFSVFGSLSNVGAMVGAIASGQMAEYIGRKGSLMIAAIPNIIGWLAISFAKDS 152
Query: 222 VFMAVXKFIXTSFXXCAQSXTYTL-LGESSSETFRDSYMLIMTSVLDFXLAVYVVAAYFI 398
F+ + + + F S T + + E S + R + + SV + V ++ AY +
Sbjct: 153 SFLYMGRLLE-GFGVGVISYTVPVYIAEISPQNMRGA----LGSVNQLSVTVGILLAYLL 207
Query: 399 LNLPFXLNFGFITFTPWRXXXXXXXXXXGISAMGMHFFYESPKFL 533
G F PWR + G+ F ESP++L
Sbjct: 208 ---------GM--FVPWRLLAVIGILPCTVLIPGLFFIPESPRWL 241
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNW 221
++ + +L S+ F G + A WG+++D GR+ LL + + + SAF+PN+
Sbjct: 245 EWNISAENESLLSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNY 304
Query: 222 VFMAVXKFI 248
+ +F+
Sbjct: 305 SCLLALRFL 313
>10_06_0088 - 10538037-10539463,10539696-10539789
Length = 506
Score = 37.9 bits (84), Expect = 0.005
Identities = 37/168 (22%), Positives = 66/168 (39%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNW 221
D + + +Q +L + V + + G ++D GR+ ++ +A + SV APN+
Sbjct: 46 DLKTNDTQVQVLAGILNVCALVGSLTAGRVSDCVGRRLTISLAACIFLVGSVLMGLAPNF 105
Query: 222 VFMAVXKFIXTSFXXCAQSXTYTLLGESSSETFRDSYMLIMTSVLDFXLAVYVVAAYFIL 401
+ + + A E +S R S + + F + + VA Y +
Sbjct: 106 ATLLAGRCVAGVGVGYALMIAPVYAAEIASADIRGSLTSLPEICISFGILIGYVANYLLA 165
Query: 402 NLPFXLNFGFITFTPWRXXXXXXXXXXGISAMGMHFFYESPKFLVNAG 545
LP L +G WR A+G+ ESP++LV G
Sbjct: 166 KLP--LVYG------WRAMLGLGALPSAALALGVLAMPESPRWLVVQG 205
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 37.1 bits (82), Expect = 0.009
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNW 221
D +L +S+ S+ VG + A G +A+ GRK SL+IA + I +A +FA +
Sbjct: 94 DLKLSISEFSAFGSLSNVGAMVGAIASGQMAEYIGRKGSLIIAAVPNIIGWLAISFAKDA 153
Query: 222 VFMAVXKFIXTSFXXCAQSXTYTL-LGESSSETFRDSYMLIMTSVLDFXLAVYVVAAYFI 398
F+ + + + F S T + + E S + R + + SV + + ++ AY +
Sbjct: 154 SFLYMGRLLE-GFGVGVISYTVPVYIAEISHQNTRGA----LGSVNQLSVTIGILLAYLL 208
Query: 399 LNLPFXLNFGFITFTPWRXXXXXXXXXXGISAMGMHFFYESPKFL 533
G F PWR + G+ F ESP++L
Sbjct: 209 ---------GM--FVPWRLLAVIGSIPCTLLIPGLFFIPESPRWL 242
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 35.5 bits (78), Expect = 0.028
Identities = 13/54 (24%), Positives = 33/54 (61%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVAS 203
+++L ++ S+ FVG + AY WG ++D GR+ +++ ++ ++++ +S
Sbjct: 78 EWELSAQAESLITSVVFVGMLVGAYSWGIVSDNYGRRQAVMPSLGWRWLLAFSS 131
>01_03_0126 + 12741397-12743022
Length = 541
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +3
Query: 27 TGATCDFQLDLSQTXILL--SMPFVGPIAMAYPWGYIADTK-GRKTSLLIAMWGSFIVSV 197
T D+ L+ + L S F G +A + +ADT GR+ LL+++ + +
Sbjct: 110 TSVVSDWALNCGPALVSLPASSFFAGNLAGGFLLATLADTHLGRRKMLLLSLVTMSVAAA 169
Query: 198 ASAFAPN-WVFMAV 236
+AF+PN WV+ A+
Sbjct: 170 LTAFSPNVWVYSAL 183
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRK 152
+++L Q ++ S+ FVG + AY WG ++D GR+
Sbjct: 56 EWKLTSHQESMITSIVFVGMLIGAYTWGVVSDNYGRR 92
>10_08_1053 -
22575281-22575409,22575516-22575653,22575786-22575884,
22576281-22576361,22577171-22577233,22577473-22577520,
22577622-22577990,22578082-22578183,22578290-22578414,
22578500-22578566,22578817-22578895,22578928-22579079,
22579182-22579223
Length = 497
Score = 31.9 bits (69), Expect = 0.34
Identities = 33/136 (24%), Positives = 58/136 (42%)
Frame = +3
Query: 129 IADTKGRKTSLLIAMWGSFIVSVASAFAPNWVFMAVXKFIXTSFXXCAQSXTYTLLGESS 308
IAD GR+ L+++ I ++ +A APN+ M V +F A + E++
Sbjct: 109 IADFLGRRRELILSSVSYLIGALLTAAAPNFPIMVVGRFFYGIGIGLAMHAAPMYIAETA 168
Query: 309 SETFRDSYMLIMTSVLDFXLAVYVVAAYFILNLPFXLNFGFITFTPWRXXXXXXXXXXGI 488
R MLI S+ +F + + ++ Y +L + G WR I
Sbjct: 169 PSQIRG--MLI--SLKEFFIVLGMLLGYIAGSLFVEVVSG------WRYMYATSTPLCLI 218
Query: 489 SAMGMHFFYESPKFLV 536
+GM + SP++L+
Sbjct: 219 MGIGMCWLPASPRWLL 234
>07_03_0898 - 22403337-22404950
Length = 537
Score = 31.5 bits (68), Expect = 0.45
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Frame = +3
Query: 75 LLSMP----FVGPIAMAYPWGYIADTK-GRKTSLLIAMWGSFIVSVASAFAPN-WVFMAV 236
L+S+P F G +A + +ADT GR+ L++++ + V +AF+PN WV+ A+
Sbjct: 118 LVSLPASSFFAGNLAGGFLLTTLADTHLGRRKMLVLSLATMSVAGVLTAFSPNVWVYAAL 177
>07_03_0896 + 22373348-22374946
Length = 532
Score = 31.1 bits (67), Expect = 0.60
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Frame = +3
Query: 75 LLSMP----FVGPIAMAYPWGYIADTK-GRKTSLLIAMWGSFIVSVASAFAPN-WVFMA- 233
L+S+P F G +A + +AD+ GR+ LL+++ + V +AF+PN W + A
Sbjct: 117 LVSLPASSFFAGCLAGGFLLTTLADSLLGRRKMLLVSLASMSVAGVLTAFSPNVWAYAAL 176
Query: 234 --VXKFIXTSFXXCAQSXTYTLLGESSSET 317
V F + CA + L+G+ +T
Sbjct: 177 RFVCGFGRSMVGTCALVLSTELVGKRWRDT 206
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 30.3 bits (65), Expect = 1.0
Identities = 35/168 (20%), Positives = 66/168 (39%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNW 221
D L ++ +L V +A G+ ADT GR+ ++++A ++A + +
Sbjct: 61 DMGLSDAEIEVLAGSMNVFMLASILAAGWAADTLGRRGTIVLANAFLMAGALAMSLGATY 120
Query: 222 VFMAVXKFIXTSFXXCAQSXTYTLLGESSSETFRDSYMLIMTSVLDFXLAVYVVAAYFIL 401
+ +F+ + A+ E S + R ++TS+LD + V ++ +Y +
Sbjct: 121 AALMAARFVTSVGVGFARVVAPVYNAEISPASTRG----VLTSLLDMFINVGILLSY-VS 175
Query: 402 NLPFXLNFGFITFTPWRXXXXXXXXXXGISAMGMHFFYESPKFLVNAG 545
N F G WR A + ESP++L G
Sbjct: 176 NYAFA---GLPVHLGWRVMFAIGAVPPVFLAAAVLAMPESPRWLAMRG 220
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 90 FVGPIAMAYPWGYIADTKGRKTSLLIAM 173
F+G A PWG AD GRK ++I++
Sbjct: 94 FLGRTISAVPWGIFADKYGRKPCIVISI 121
>07_03_0899 + 22421038-22422642
Length = 534
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = +3
Query: 75 LLSMP----FVGPIAMAYPWGYIADTK-GRKTSLLIAMWGSFIVSVASAFAPN-WVFMAV 236
L+S+P F G +A + +ADT GR+ L++++ + V + F+PN WV+ A+
Sbjct: 126 LVSLPASSFFAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVAGVLTVFSPNVWVYAAL 185
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 75 LLSMPFVGPIAMAYPWGYIADTKGRKTSLLIA 170
++SM VG I A G+I DT GR+ S L+A
Sbjct: 76 IVSMALVGAIIGAAGGGWINDTYGRRKSTLVA 107
>07_03_1045 + 23528768-23528879,23528979-23530399
Length = 510
Score = 28.7 bits (61), Expect = 3.2
Identities = 34/168 (20%), Positives = 64/168 (38%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNW 221
DF + + +L+ + + + ++ G +D GR+ +++ A F + FA N+
Sbjct: 52 DFNISDGKVEVLMGILNLYSLIGSFAAGRTSDWIGRRYTIVFAAVIFFAGAFLMGFAVNY 111
Query: 222 VFMAVXKFIXTSFXXCAQSXTYTLLGESSSETFRDSYMLIMTSVLDFXLAVYVVAAYFIL 401
+ +F+ A E S + R ++F + + V+ Y
Sbjct: 112 AMLMFGRFVAGIGVGYALMIAPVYTAEVSPASARGFLTSFPEVFINFGILLGYVSNYAFS 171
Query: 402 NLPFXLNFGFITFTPWRXXXXXXXXXXGISAMGMHFFYESPKFLVNAG 545
LP LN G WR + A+ + ESP++LV G
Sbjct: 172 RLP--LNLG------WRIMLGIGAAPSVLLALMVLGMPESPRWLVMKG 211
>01_01_0870 - 6789903-6792251
Length = 782
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 368 SCLRCCRLFHSKSPIXLELWLHNVYAMASLDSXP 469
+CL C + +LW HN+Y ++S D P
Sbjct: 365 ACLNKCYCVAYSNESGCKLWYHNLYNLSSADKPP 398
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRK 152
D QL LS+ + S+ +G + A G++AD GRK
Sbjct: 55 DLQLSLSEYSVFGSIITIGAMIGAVASGHLADISGRK 91
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 30 GATCDFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIA 170
G DF L S+ + S+ +G + A G +AD+ GRKT++ +A
Sbjct: 1015 GIVNDFGLSNSEYGVFGSVLTIGAMIGALTSGRLADSLGRKTTMGLA 1061
>12_01_0303 - 2287875-2289593
Length = 572
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPI-AMAYPWGYIADTKGRKTSLLIAMWG 179
D + L+ T + + FVG + ++ YP + ADT + SLL A G
Sbjct: 239 DAMISLATTRLSWTNSFVGSVHSLVYPSDFAADTHTPRRSLLDAKSG 285
>12_01_0062 + 530180-532398,533123-533213,533398-533613
Length = 841
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 395 HSKSPIXLELWLHNVYAMASLDSXPSVAS 481
HS + + + L LH V A LDS P V S
Sbjct: 104 HSSNKLLIALSLHGVAVRAGLDSNPFVGS 132
>11_01_0060 + 453615-454030,454086-455862
Length = 730
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 395 HSKSPIXLELWLHNVYAMASLDSXPSVAS 481
HS + + + L LH V A LDS P V S
Sbjct: 106 HSSNKLLIALSLHGVAVRAGLDSNPFVGS 134
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/69 (21%), Positives = 34/69 (49%)
Frame = +3
Query: 42 DFQLDLSQTXILLSMPFVGPIAMAYPWGYIADTKGRKTSLLIAMWGSFIVSVASAFAPNW 221
D ++ +Q IL + + + + G +D GR+ ++++A F ++ APN+
Sbjct: 54 DLKITDTQIEILAGVINIYSLFGSLAAGMTSDWLGRRYTMVLAAAIFFTGALLMGLAPNY 113
Query: 222 VFMAVXKFI 248
F+ +F+
Sbjct: 114 AFLMAGRFV 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,344,061
Number of Sequences: 37544
Number of extensions: 266661
Number of successful extensions: 611
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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