Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19l23
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 39 0.004
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 39 0.004
AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical ... 33 0.26
Z68337-3|CAA92750.2| 712|Caenorhabditis elegans Hypothetical pr... 31 0.60
AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical... 31 0.80
AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical... 31 1.1
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 2.4
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 29 2.4
U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical pr... 29 2.4
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 29 2.4
Z81051-9|CAD21703.1| 531|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z99270-2|CAB16469.3| 477|Caenorhabditis elegans Hypothetical pr... 28 5.6
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 28 5.6
AF016686-5|ABO16458.1| 407|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68303-7|CAA92642.2| 445|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF435979-1|AAM46663.1| 445|Caenorhabditis elegans equilibrative... 27 9.8
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/166 (20%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 44 VKSTKSKQDVKQQDA-EDALSKKSLTKVQSHFLVPSEKLDKVTRRVIAPYAQIERKGLKE 220
++ + K D+ +++ E A + + +QS +V SE+ ++ R +AQ+E+K +
Sbjct: 403 IREIQEKHDLLEKERIEQARVAERIANIQSRLIVGSEEDGRLESRTKEQHAQLEKKRREL 462
Query: 221 SEQKARKYLDINRFNVFLDDEIDLDALLYETAMVLKNFTNSSGVFVYTVDQMKGEIVLMS 400
+EQK R+ + +D +DL + ++ T + + Q + EI +S
Sbjct: 463 AEQKRREREMVEALERQEEDTVDLKQTFSDLRTEVEAKTKKLKKMLIKLRQARNEIRDVS 522
Query: 401 QNTKNPDRHEVNIPIGE-NKVVAAHVAFTKEMLVLDDVQRDRRFAE 535
+ +R +++ I E +K + + + + D +R + AE
Sbjct: 523 -GAYSDERQDLDQTIAEVSKELKLKLLIVENFIPRDVSERIKERAE 567
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/166 (20%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 44 VKSTKSKQDVKQQDA-EDALSKKSLTKVQSHFLVPSEKLDKVTRRVIAPYAQIERKGLKE 220
++ + K D+ +++ E A + + +QS +V SE+ ++ R +AQ+E+K +
Sbjct: 417 IREIQEKHDLLEKERIEQARVAERIANIQSRLIVGSEEDGRLESRTKEQHAQLEKKRREL 476
Query: 221 SEQKARKYLDINRFNVFLDDEIDLDALLYETAMVLKNFTNSSGVFVYTVDQMKGEIVLMS 400
+EQK R+ + +D +DL + ++ T + + Q + EI +S
Sbjct: 477 AEQKRREREMVEALERQEEDTVDLKQTFSDLRTEVEAKTKKLKKMLIKLRQARNEIRDVS 536
Query: 401 QNTKNPDRHEVNIPIGE-NKVVAAHVAFTKEMLVLDDVQRDRRFAE 535
+ +R +++ I E +K + + + + D +R + AE
Sbjct: 537 -GAYSDERQDLDQTIAEVSKELKLKLLIVENFIPRDVSERIKERAE 581
>AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein.
Length = 782
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/166 (20%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 44 VKSTKSKQDVKQQDA-EDALSKKSLTKVQSHFLVPSEKLDKVTRRVIAPYAQIERKGLKE 220
++ + K D+ +++ E A + + +QS +V SE+ ++ R +AQ+E+K +
Sbjct: 417 IREIQEKHDLLEKERIEQARVAERIANIQSRLIVGSEEDGRLESRTKEQHAQLEKKRREL 476
Query: 221 SEQKARKYLDINRFNVFLDDEIDLDALLYETAMVLKNFTNSSGVFVYTVDQMKGEIVLMS 400
+EQK R+ + +D +DL + ++ T + + Q + EI +S
Sbjct: 477 AEQKRREREMVEALERQEEDTVDLKQTFSDLRTEVEAKTKKLKKMLIKLRQARNEIRDVS 536
Query: 401 QNTKNPDRHEVNIPIGE-NKVVAAHVAFTKEMLVLDDVQRDRRFAE 535
+ +R +++ I E +K + + + + D +R + AE
Sbjct: 537 -GAYSDERQDLDQTIAEVSKELKLKLLIVENFIPRDVSERIKERAE 581
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/166 (20%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 44 VKSTKSKQDVKQQDA-EDALSKKSLTKVQSHFLVPSEKLDKVTRRVIAPYAQIERKGLKE 220
++ + K D+ +++ E A + + +QS +V SE+ ++ R +AQ+E+K +
Sbjct: 366 IREIQEKHDLLEKERIEQARVAERIANIQSRLIVGSEEDGRLESRTKEQHAQLEKKRREL 425
Query: 221 SEQKARKYLDINRFNVFLDDEIDLDALLYETAMVLKNFTNSSGVFVYTVDQMKGEIVLMS 400
+EQK R+ + +D +DL + ++ T + + Q + EI +S
Sbjct: 426 AEQKRREREMVEALERQEEDTVDLKQTFSDLRTEVEAKTKKLKKMLIKLRQARNEIRDVS 485
Query: 401 QNTKNPDRHEVNIPIGE-NKVVAAHVAFTKEMLVLDDVQRDRRFAE 535
+ +R +++ I E +K + + + + D +R + AE
Sbjct: 486 -GAYSDERQDLDQTIAEVSKELKLKLLIVENFIPRDVSERIKERAE 530
>AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical
protein H27M09.3 protein.
Length = 605
Score = 32.7 bits (71), Expect = 0.26
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Frame = +2
Query: 14 KMMHELTPKNVKSTKSKQDVKQQDAEDALSKKSLTKVQS-------------HFLVPSEK 154
KM+ +L K V K + ++ AE A S K K++S H S +
Sbjct: 42 KMLAKLLTKMVSEAKGIYALDERRAELAKSGKLQEKLKSAYQTSLTVMEDRLHIAELSRQ 101
Query: 155 LDKVTRRVIAPYAQIE--RKGLKESEQKARKYLDINRFNVFLDDEIDLDALLYETAMVLK 328
+ + V Y + + RK ++E+ +AR+ +IN + +D + L+ ++A +LK
Sbjct: 102 VQEKKLTVQQKYYECDDLRKSVQETNTEARRVQEINEQRL-VDTTRATEELIVKSASILK 160
Query: 329 NFTNSSGV 352
N NSS V
Sbjct: 161 NLENSSDV 168
>Z68337-3|CAA92750.2| 712|Caenorhabditis elegans Hypothetical
protein M7.3 protein.
Length = 712
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/66 (22%), Positives = 34/66 (51%)
Frame = +2
Query: 71 VKQQDAEDALSKKSLTKVQSHFLVPSEKLDKVTRRVIAPYAQIERKGLKESEQKARKYLD 250
+K ++DA ++ V HFL+ E L+ T+ + + + ++E ++ K+L+
Sbjct: 214 IKMTGSQDASVLFAIRLVLHHFLLTEEYLNISTQVLAREELNYQLENVEEHRERISKFLN 273
Query: 251 INRFNV 268
+FN+
Sbjct: 274 FGKFNI 279
>AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical
protein Y119C1B.1 protein.
Length = 273
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 35 PKNVKSTKSKQDVKQQDAEDALSKKSLTKVQSHFLVPSEKLDKVTRRVIAPYAQIERKGL 214
P KST KQ + + D D+ S KSL K++S + L +R+ P ++ +
Sbjct: 203 PSKDKSTSKKQKMLRSDMADSASPKSLKKIKS----SKDPLRSSSRKTTKPSKKLSGRSS 258
Query: 215 KE--SEQKARK 241
K+ + +K++K
Sbjct: 259 KKNLASKKSKK 269
>AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical
protein Y75B8A.32 protein.
Length = 444
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +2
Query: 14 KMMHELTPKNVKSTKSKQDVKQQDAEDALSKKS-LTKVQSHFLVPSEK---LDKVTRRVI 181
+M + TP +VK +K +K+ AE KK +TK++ + P EK + K R
Sbjct: 213 RMPAKKTP-SVKRVTNKTAIKKIPAEKLPGKKPRMTKIERMSMTPEEKTKHIKKQNRTNT 271
Query: 182 APYAQIERKGLKESEQK 232
A Y ++K L++++ K
Sbjct: 272 ATYDLKQKKKLEDAQNK 288
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 475 HVGSYDLILSNRYVNFVSIRILR--ILGH*DDLTLHLIDRVYKNSGTIGKVFQ 323
HVG Y L+ + NF +++ + I GH ++ + +ID+ N ++ K+F+
Sbjct: 36 HVGKYKLLKTIGKGNFAKVKLAKHVITGH--EVAIKIIDKTALNPSSLQKLFR 86
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 475 HVGSYDLILSNRYVNFVSIRILR--ILGH*DDLTLHLIDRVYKNSGTIGKVFQ 323
HVG Y L+ + NF +++ + I GH ++ + +ID+ N ++ K+F+
Sbjct: 118 HVGKYKLLKTIGKGNFAKVKLAKHVITGH--EVAIKIIDKTALNPSSLQKLFR 168
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 475 HVGSYDLILSNRYVNFVSIRILR--ILGH*DDLTLHLIDRVYKNSGTIGKVFQ 323
HVG Y L+ + NF +++ + I GH ++ + +ID+ N ++ K+F+
Sbjct: 166 HVGKYKLLKTIGKGNFAKVKLAKHVITGH--EVAIKIIDKTALNPSSLQKLFR 216
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 475 HVGSYDLILSNRYVNFVSIRILR--ILGH*DDLTLHLIDRVYKNSGTIGKVFQ 323
HVG Y L+ + NF +++ + I GH ++ + +ID+ N ++ K+F+
Sbjct: 36 HVGKYKLLKTIGKGNFAKVKLAKHVITGH--EVAIKIIDKTALNPSSLQKLFR 86
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 475 HVGSYDLILSNRYVNFVSIRILR--ILGH*DDLTLHLIDRVYKNSGTIGKVFQ 323
HVG Y L+ + NF +++ + I GH ++ + +ID+ N ++ K+F+
Sbjct: 118 HVGKYKLLKTIGKGNFAKVKLAKHVITGH--EVAIKIIDKTALNPSSLQKLFR 168
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 475 HVGSYDLILSNRYVNFVSIRILR--ILGH*DDLTLHLIDRVYKNSGTIGKVFQ 323
HVG Y L+ + NF +++ + I GH ++ + +ID+ N ++ K+F+
Sbjct: 166 HVGKYKLLKTIGKGNFAKVKLAKHVITGH--EVAIKIIDKTALNPSSLQKLFR 216
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 475 HVGSYDLILSNRYVNFVSIRILR--ILGH*DDLTLHLIDRVYKNSGTIGKVFQ 323
HVG Y L+ + NF +++ + I GH ++ + +ID+ N ++ K+F+
Sbjct: 118 HVGKYKLLKTIGKGNFAKVKLAKHVITGH--EVAIKIIDKTALNPSSLQKLFR 168
>U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical
protein B0286.1 protein.
Length = 230
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 26 ELTPKNVKSTKSKQDVKQQDAEDALSKKSLTKVQSHFLVPSEKLDKVTRRVIAPYAQIER 205
ELT + K+ K+ + D SKK++ K + EK++ + +V Y+ E
Sbjct: 61 ELTDCQTLKEEPKEQKKENNKNDENSKKTIEKYEQEIAGLKEKIEGLEEKVKNNYSD-EN 119
Query: 206 KGLKE 220
LKE
Sbjct: 120 SSLKE 124
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 475 HVGSYDLILSNRYVNFVSIRILR--ILGH*DDLTLHLIDRVYKNSGTIGKVFQ 323
HVG Y L+ + NF +++ + I GH ++ + +ID+ N ++ K+F+
Sbjct: 166 HVGKYKLLKTIGKGNFAKVKLAKHVITGH--EVAIKIIDKTALNPSSLQKLFR 216
>Z81051-9|CAD21703.1| 531|Caenorhabditis elegans Hypothetical
protein C55A6.10 protein.
Length = 531
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/79 (21%), Positives = 34/79 (43%)
Frame = +2
Query: 287 DLDALLYETAMVLKNFTNSSGVFVYTVDQMKGEIVLMSQNTKNPDRHEVNIPIGENKVVA 466
+L L+ + K T+ + VDQ+ + + T +PD H I + K+
Sbjct: 142 NLLTLMRMEVFMKKQMTDMIRARNWEVDQLSKQCEKLVAETGDPDMHPHKISMLNEKLRQ 201
Query: 467 AHVAFTKEMLVLDDVQRDR 523
H ++ ++ L D Q+ +
Sbjct: 202 VHTTYSFQVADLSDTQKSK 220
>Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical
protein T09E8.4 protein.
Length = 406
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 395 LRRSHPSFDRPCIQKLRNYW 336
LRR FDRPC++ L+ +W
Sbjct: 119 LRRKPMPFDRPCLKTLKYFW 138
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 317 MVLKNFTNSSGVFVYTVDQMKGEIVLMSQNTKNPDRHEVNIPI-GEN-KVV 463
+V NFTN+ G++ TVD + N K + + I GEN K+V
Sbjct: 631 IVKNNFTNNGGIYTVTVDTNLHDAYFTDNNLKGNENSGAVLKISGENVKIV 681
>Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical
protein K09A9.3 protein.
Length = 450
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 91 FGVLLLHVLFAFCRFHILRSEFVHHFY 11
F + L+ ++F F FHIL+ + + FY
Sbjct: 221 FSIALITLVFCFISFHILKKQRFYQFY 247
>Z99270-2|CAB16469.3| 477|Caenorhabditis elegans Hypothetical
protein Y37A1A.2 protein.
Length = 477
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 359 YTVDQMKGEIVLMSQNTKNPDR 424
Y V M E VL S +TKNPDR
Sbjct: 29 YDVQSMMAESVLHSVSTKNPDR 50
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 687 PSKPRSQQCTQCHHHMAQHASLYISKTAWHSPSGFNT 577
PSK ++Q Q H M S + +T +H PS +T
Sbjct: 250 PSKKKAQGTVQQEHQMISMTSAHQGQTEFHQPSHQST 286
>AF016686-5|ABO16458.1| 407|Caenorhabditis elegans Hypothetical
protein R07C3.7 protein.
Length = 407
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 107 KSLTKVQSHFLVPSEKLDKVTRRVIAPYAQIE 202
KSL H L+PSE+LDK+ + + +E
Sbjct: 233 KSLNLKVQHLLIPSEELDKILEAIRPNLSSLE 264
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 298 RVQIDLVIQEHVESVNIEIFPGLLF 224
R +I+ V+ E++ES E+ PG+LF
Sbjct: 295 RSEINKVVNEYIESGVAELMPGVLF 319
>Z68303-7|CAA92642.2| 445|Caenorhabditis elegans Hypothetical
protein ZK809.4 protein.
Length = 445
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 91 FGVLLLHVLFAFCRFHILRSEFVHHFY 11
F + L+ ++F F FHIL+ + + +Y
Sbjct: 216 FSIALITLVFCFISFHILKKQRFYQYY 242
>AF435979-1|AAM46663.1| 445|Caenorhabditis elegans equilibrative
nucleoside transporter1 protein.
Length = 445
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 91 FGVLLLHVLFAFCRFHILRSEFVHHFY 11
F + L+ ++F F FHIL+ + + +Y
Sbjct: 216 FSIALITLVFCFISFHILKKQRFYQYY 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,874,678
Number of Sequences: 27780
Number of extensions: 330816
Number of successful extensions: 1099
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -