Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19l11
(622 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 2.4
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 2.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.7
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 9.7
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 454 SRLLEYDSSKTDIFGIHMYTGRSGGRPLPR 365
S +++ DS ++G H+Y GR+ G PL +
Sbjct: 626 SNVVQIDSP---VWGRHIYDGRAMGFPLDK 652
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 454 SRLLEYDSSKTDIFGIHMYTGRSGGRPLPR 365
S +++ DS ++G H+Y GR+ G PL +
Sbjct: 626 SNVVQIDSP---VWGRHIYDGRAMGFPLDK 652
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 115 FKIKCKAEINITVFEDIFCELLY 47
FK CK +I F+D CE+ +
Sbjct: 144 FKSTCKIDITWFPFDDQRCEMKF 166
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 115 FKIKCKAEINITVFEDIFCELLY 47
FK CK +I F+D C++ +
Sbjct: 107 FKSTCKIDITWFPFDDQHCDMKF 129
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 115 FKIKCKAEINITVFEDIFCELLY 47
FK CK +I F+D C++ +
Sbjct: 107 FKSTCKIDITWFPFDDQHCDMKF 129
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 115 FKIKCKAEINITVFEDIFCELLY 47
FK CK +I F+D C++ +
Sbjct: 175 FKSTCKIDITWFPFDDQHCDMKF 197
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 115 FKIKCKAEINITVFEDIFCELLY 47
FK CK +I F+D C++ +
Sbjct: 175 FKSTCKIDITWFPFDDQHCDMKF 197
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 613 RSRAHAATLASCCDVSA 563
R AH L CCD A
Sbjct: 738 RYEAHCFALCHCCDFDA 754
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 115 FKIKCKAEINITVFEDIFCELLY 47
FK CK +I F+D C++ +
Sbjct: 107 FKSTCKIDIAWFPFDDQHCDMKF 129
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 115 FKIKCKAEINITVFEDIFCELLY 47
FK CK +I F+D C++ +
Sbjct: 107 FKSTCKMDIAWFPFDDQHCDMKF 129
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.0 bits (42), Expect = 9.7
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -1
Query: 112 KIKC--KAEINITVFEDIFCELLYIC 41
K+ C +AE N + EDI+ L Y C
Sbjct: 107 KLLCNVEAEENYNLLEDIYETLSYDC 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,497
Number of Sequences: 438
Number of extensions: 3535
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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