Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19l06
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2172|AAN11851.2|  528|Drosophila melanogaster CG32112-P...    29   7.3  
AY119219-1|AAM51079.1|  440|Drosophila melanogaster SD16468p pro...    28   9.6  
AE013599-2544|AAF57805.1|  440|Drosophila melanogaster CG4984-PA...    28   9.6  

>AE014296-2172|AAN11851.2|  528|Drosophila melanogaster CG32112-PA,
           isoform A protein.
          Length = 528

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 176 YLETAHRQPHGDRNADKPLKRNIHHDYCKLYTSYSFKRVI 57
           + E    +P   RNA  P+   + HD+  L T + F++VI
Sbjct: 17  FFEKGWGKPENLRNALPPVDTGLDHDFRFLRTVFQFRKVI 56


>AY119219-1|AAM51079.1|  440|Drosophila melanogaster SD16468p
           protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 23/124 (18%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
 Frame = +3

Query: 48  LIKNYSFKAITCI*LAIIVMYIAFKWLVGISVAMWLAMCSLQ-IILKRNTKPNLGIYQGV 224
           L++ Y F+    +  +++++     W+V IS   W+ +   + I +  + +  +  + G+
Sbjct: 19  LMEAYMFQRRVLLGCSLLMVVSLLIWIVAISTDHWIIISGGKGIFIPESRRFFMSSHSGL 78

Query: 225 YFHSTSRLKNYTLPKPKKVDVIVLNSKSVTLVYCLIITVGALAFSIFQKEFIKIFTEKNL 404
           + H     +N  +P       +V N  S++  Y     +     ++ Q +FIK F  + L
Sbjct: 79  WRH----CRNTIVPNAMSNAQVVRNFSSMS--YTSQTNINEAKRNLSQMDFIKEFAHEKL 132

Query: 405 AVNN 416
             ++
Sbjct: 133 ETSD 136


>AE013599-2544|AAF57805.1|  440|Drosophila melanogaster CG4984-PA
           protein.
          Length = 440

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 23/124 (18%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
 Frame = +3

Query: 48  LIKNYSFKAITCI*LAIIVMYIAFKWLVGISVAMWLAMCSLQ-IILKRNTKPNLGIYQGV 224
           L++ Y F+    +  +++++     W+V IS   W+ +   + I +  + +  +  + G+
Sbjct: 19  LMEAYMFQRRVLLGCSLLMVVSLLIWIVAISTDHWIIISGGKGIFIPESRRFFMSSHSGL 78

Query: 225 YFHSTSRLKNYTLPKPKKVDVIVLNSKSVTLVYCLIITVGALAFSIFQKEFIKIFTEKNL 404
           + H     +N  +P       +V N  S++  Y     +     ++ Q +FIK F  + L
Sbjct: 79  WRH----CRNTIVPNAMSNAQVVRNFSSMS--YTSQTNINEAKRNLSQMDFIKEFAHEKL 132

Query: 405 AVNN 416
             ++
Sbjct: 133 ETSD 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,798,838
Number of Sequences: 53049
Number of extensions: 467342
Number of successful extensions: 1071
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)