Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19l05
         (455 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ236910-1|CAC27121.1|  111|Homo sapiens ESP13.2 protein protein.      31   2.5  
AK123288-1|BAC85574.1|  161|Homo sapiens protein ( Homo sapiens ...    29   7.6  
BC061703-1|AAH61703.1|  582|Homo sapiens PAP associated domain c...    29   10.0 
AY364242-1|AAQ76801.1|  582|Homo sapiens hypothetical protein pr...    29   10.0 
AL353796-1|CAH72262.1|  582|Homo sapiens novel protein protein.        29   10.0 
AL161651-3|CAI14218.1|  582|Homo sapiens novel protein protein.        29   10.0 
AK022188-1|BAB13981.1|  582|Homo sapiens protein ( Homo sapiens ...    29   10.0 
AK001348-1|BAA91641.1|  582|Homo sapiens protein ( Homo sapiens ...    29   10.0 
AB194709-1|BAD98252.1|  582|Homo sapiens mitochondrial polyA pol...    29   10.0 

>AJ236910-1|CAC27121.1|  111|Homo sapiens ESP13.2 protein protein.
          Length = 111

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 35  MNFLMLIILMMHGISALYYGNVGKRGCLSYNGTCVEQC-PDNMHRVNSECRATPSQRTCD 211
           M FL+  + +   ++ L  GN   + CL+  G C ++C P+ MH V +       QR C 
Sbjct: 1   MKFLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMH-VKNGWAMCGKQRDCC 59

Query: 212 EP 217
            P
Sbjct: 60  VP 61


>AK123288-1|BAC85574.1|  161|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41294 fis, clone BRAMY2039872, moderately
           similar to Homo sapiens protein phosphatase
           methylesterase-1 (PME-1) mRNA. ).
          Length = 161

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
 Frame = +2

Query: 140 EQCPDNMHRVNSECRATPSQRTCD--EPVSISLGIIC----GWSRCDC 265
           E  PD +  V S+C+ T  + T D  E  S+SL + C     WS C C
Sbjct: 77  EDAPDKVSLVLSDCKRTTVRITLDVTEDKSLSLSLHCLQQLLWSLCRC 124


>BC061703-1|AAH61703.1|  582|Homo sapiens PAP associated domain
           containing 1 protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 380 TSSIRGFWIIPFSLCKINVFFFKKK 454
           TSSI G WI  FSL  + +FF +++
Sbjct: 367 TSSIPGAWITNFSLTMMVIFFLQRR 391


>AY364242-1|AAQ76801.1|  582|Homo sapiens hypothetical protein
           protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 380 TSSIRGFWIIPFSLCKINVFFFKKK 454
           TSSI G WI  FSL  + +FF +++
Sbjct: 367 TSSIPGAWITNFSLTMMVIFFLQRR 391


>AL353796-1|CAH72262.1|  582|Homo sapiens novel protein protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 380 TSSIRGFWIIPFSLCKINVFFFKKK 454
           TSSI G WI  FSL  + +FF +++
Sbjct: 367 TSSIPGAWITNFSLTMMVIFFLQRR 391


>AL161651-3|CAI14218.1|  582|Homo sapiens novel protein protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 380 TSSIRGFWIIPFSLCKINVFFFKKK 454
           TSSI G WI  FSL  + +FF +++
Sbjct: 367 TSSIPGAWITNFSLTMMVIFFLQRR 391


>AK022188-1|BAB13981.1|  582|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12126 fis, clone MAMMA1000163. ).
          Length = 582

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 380 TSSIRGFWIIPFSLCKINVFFFKKK 454
           TSSI G WI  FSL  + +FF +++
Sbjct: 367 TSSIPGAWITNFSLTMMVIFFLQRR 391


>AK001348-1|BAA91641.1|  582|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10486 fis, clone NT2RP2000205. ).
          Length = 582

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 380 TSSIRGFWIIPFSLCKINVFFFKKK 454
           TSSI G WI  FSL  + +FF +++
Sbjct: 367 TSSIPGAWITNFSLTMMVIFFLQRR 391


>AB194709-1|BAD98252.1|  582|Homo sapiens mitochondrial polyA
           polymerase protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 380 TSSIRGFWIIPFSLCKINVFFFKKK 454
           TSSI G WI  FSL  + +FF +++
Sbjct: 367 TSSIPGAWITNFSLTMMVIFFLQRR 391


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,633,689
Number of Sequences: 237096
Number of extensions: 1482325
Number of successful extensions: 2910
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2907
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)