Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19l02
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-7|AAK18856.1| 118|Caenorhabditis elegans Lc3, gabarap an... 65 2e-11
Z69385-5|CAA93421.1| 130|Caenorhabditis elegans Hypothetical pr... 34 0.052
U23511-11|AAC46797.1| 123|Caenorhabditis elegans Lc3, gabarap a... 30 0.84
AF326943-1|AAG49393.1| 123|Caenorhabditis elegans GABA A recept... 30 0.84
Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z68303-6|CAD89754.1| 708|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z68303-5|CAA92639.2| 706|Caenorhabditis elegans Hypothetical pr... 28 3.4
AF125459-11|AAD12842.2| 315|Caenorhabditis elegans Serpentine r... 28 4.5
AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical... 27 5.9
Z99277-5|CAE18042.1| 134|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z79603-7|CAB01896.1| 259|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical p... 27 7.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 27 7.8
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 27 7.8
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 27 7.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 27 7.8
>U32305-7|AAK18856.1| 118|Caenorhabditis elegans Lc3, gabarap and
gate-16 familyprotein 3 protein.
Length = 118
Score = 65.3 bits (152), Expect = 2e-11
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Frame = +1
Query: 157 NSDPSKSDKLKVDILLKATGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADEKLFLY 336
+++P KSDK V + L+ +AP++K KK V+ + + ++K L ++A+ LFLY
Sbjct: 20 SAEPPKSDK--VTVRLRNIADAPVLKNKKMVVNPTDTVASFILKLRKLLNIQANNSLFLY 77
Query: 337 VNQTFAPSPDQIVRNLYECFG---TDGKLV-LHYCKSQAWG 447
++ TFAPSPD L C+ TD +++ L Y + A+G
Sbjct: 78 IDNTFAPSPDTTFETLSRCYSVKITDKEILELQYSITPAYG 118
>Z69385-5|CAA93421.1| 130|Caenorhabditis elegans Hypothetical
protein ZK593.6 protein.
Length = 130
Score = 34.3 bits (75), Expect = 0.052
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 PIMKKKKWAVDAEKPIGWIMEFVKKYLKLEADEKLFLYVNQTFAPSPDQIVRNLY-ECFG 399
P+M + K+ V + +M V++ L+L + FL VN+ S + NLY +
Sbjct: 55 PLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERD 114
Query: 400 TDGKLVLHYCKSQAWG 447
DG + + Y A+G
Sbjct: 115 PDGFVYMVYTSQPAFG 130
>U23511-11|AAC46797.1| 123|Caenorhabditis elegans Lc3, gabarap and
gate-16 familyprotein 1 protein.
Length = 123
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADEKLFLYVNQTFAPSPDQIVRNLYE 390
+ KKK+ V ++ +G ++K ++L ++ LF +VN P + LY+
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVI-PQTMTTMGQLYQ 96
>AF326943-1|AAG49393.1| 123|Caenorhabditis elegans GABA A
receptor-associated protein protein.
Length = 123
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 229 MKKKKWAVDAEKPIGWIMEFVKKYLKLEADEKLFLYVNQTFAPSPDQIVRNLYE 390
+ KKK+ V ++ +G ++K ++L ++ LF +VN P + LY+
Sbjct: 44 LDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVI-PQTMTTMGQLYQ 96
>Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical
protein F09B9.1 protein.
Length = 710
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 235 KKKWAVDAEKPIGWIMEFVKKYLKLEADEKLFLYVNQTFAP 357
KKK V+ P+ WIM +V +YL+L LF+ +AP
Sbjct: 330 KKKMIVN---PVTWIMFYVHRYLRLTPPIMLFIGFFTVYAP 367
>Z68303-6|CAD89754.1| 708|Caenorhabditis elegans Hypothetical
protein ZK809.5b protein.
Length = 708
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 64 SKMSDEKLIDETQSQSVAGMEALRIEVDNKENSDPSKSDKLKVDILLKA 210
+K + EK DE Q + ME LR+E + E + +DK + D+ ++A
Sbjct: 189 NKENFEKCRDEWQRKMELEMEELRLERERIEVASLKSTDKRRSDMAIEA 237
>Z68303-5|CAA92639.2| 706|Caenorhabditis elegans Hypothetical
protein ZK809.5a protein.
Length = 706
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 64 SKMSDEKLIDETQSQSVAGMEALRIEVDNKENSDPSKSDKLKVDILLKA 210
+K + EK DE Q + ME LR+E + E + +DK + D+ ++A
Sbjct: 187 NKENFEKCRDEWQRKMELEMEELRLERERIEVASLKSTDKRRSDMAIEA 235
>AF125459-11|AAD12842.2| 315|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 24 protein.
Length = 315
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 299 YFFTNSIIHPIGFSASTAHFFFFIIGAFPVAFSRMS 192
YFFT SII ++ ST + F I ++F+RM+
Sbjct: 105 YFFTPSIITKTYYTMSTYNAAFKTISQIVISFNRMT 140
>AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical
protein K07H8.2a protein.
Length = 507
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -1
Query: 353 AKV*FTYRNNFSSASSLRYFFTNSIIHPIGFSASTAHFFFFIIGAFPVA 207
++V F +RN SS S Y +N +++ A +++ FF + FP A
Sbjct: 52 SRVIFRFRNENSSLKSRTYDHSNDLVNMSVIPAESSYVLFFQV-LFPFA 99
>Z99277-5|CAE18042.1| 134|Caenorhabditis elegans Hypothetical
protein Y53C12A.7 protein.
Length = 134
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 136 IEVDNKENSDPSKSDKLKVDILLKATGNAPIMKKKKWAVDAEKPIGWIM--EFVKKYLKL 309
I +N N D SKS L + ++L +P K + A++ + I M ++K++K
Sbjct: 62 ILAENSNNDDLSKSMDLLIPVMLGMLFCSPHPKVRDQAIECLRTIDQKMGKSIIEKHVKR 121
Query: 310 EADEK 324
++EK
Sbjct: 122 MSNEK 126
>Z79603-7|CAB01896.1| 259|Caenorhabditis elegans Hypothetical
protein M163.7 protein.
Length = 259
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = +1
Query: 103 SQSVAGMEALRIEVDNKENSDPSKSDKLKVDILLKATGNAPIMKKKKWAVDAEK 264
+ +++ + +++ EVD + N +PS S K + ++ ++ G + KK +DA K
Sbjct: 23 TSTISSLNSIQFEVDIEHNVNPSMSRK-REELYARSIGYMNLRKKISAFLDAIK 75
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 280 MEFVKKYLK-LEADEKLFLYVNQTFAPSPDQIVRNLYECFGTD 405
M + K +K L + L VNQT D+++ +LY+C TD
Sbjct: 664 MRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHLYQCGDTD 706
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 280 MEFVKKYLK-LEADEKLFLYVNQTFAPSPDQIVRNLYECFGTD 405
M + K +K L + L VNQT D+++ +LY+C TD
Sbjct: 664 MRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHLYQCGDTD 706
>Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical
protein K03H1.11 protein.
Length = 296
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 136 IEVDNKENSDPSKSDKLKVDILLKATGNAPIMKKKKWAVDAEKPIGWIMEFVKKYLKLEA 315
++++N+ D ++L LL+ T NAP+ + +D E+ W + + Y KLE
Sbjct: 95 LQLENELVGDEISDEQLAQ--LLQLTKNAPLKQLALSEIDLERINTWTLALLAGYDKLEK 152
Query: 316 DE 321
E
Sbjct: 153 VE 154
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 280 MEFVKKYLK-LEADEKLFLYVNQTFAPSPDQIVRNLYECFGTD 405
M + K +K L + L VNQT D+++ +LY+C TD
Sbjct: 664 MRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHLYQCGDTD 706
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 25 EYLHTFTNLQF*KSKMSDEKLIDETQSQSVAGMEALRIEVDNKENSDPSKSDKLKVDI 198
EYL + Q +M EKL ++ + G ++E+D +SD K D+
Sbjct: 426 EYLKAYGLTQEDLEEMKREKLEEQKARKEACGDNEEKMEIDESPSSDAQKPSTSSSDL 483
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 25 EYLHTFTNLQF*KSKMSDEKLIDETQSQSVAGMEALRIEVDNKENSDPSKSDKLKVDI 198
EYL + Q +M EKL ++ + G ++E+D +SD K D+
Sbjct: 426 EYLKAYGLTQEDLEEMKREKLEEQKARKEACGDNEEKMEIDESPSSDAQKPSTSSSDL 483
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 280 MEFVKKYLK-LEADEKLFLYVNQTFAPSPDQIVRNLYECFGTD 405
M + K +K L + L VNQT D+++ +LY+C TD
Sbjct: 664 MRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHLYQCGDTD 706
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,195,920
Number of Sequences: 27780
Number of extensions: 225360
Number of successful extensions: 665
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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