Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19k23
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0253 - 6319198-6319240,6319364-6319552,6319650-6319995,632...    30   2.0  
11_01_0762 + 6400052-6401845,6401977-6402609                           29   3.5  

>09_02_0253 -
           6319198-6319240,6319364-6319552,6319650-6319995,
           6320811-6320893,6320977-6321074,6321384-6321461,
           6321891-6322000,6322083-6322180,6323199-6323296,
           6323403-6323463,6323688-6323831,6324103-6324206,
           6324634-6324787,6324860-6324879,6324967-6325029,
           6326521-6326632,6326711-6326796,6326872-6326899,
           6327242-6327293,6329034-6329250
          Length = 727

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 359 LTISHIK*QYICTVVFQFEGHCSQSNYWTY 270
           L+I H+K QY+C  ++     C   NY+ Y
Sbjct: 275 LSIDHVKLQYLCITIYHLLIACFTVNYFIY 304


>11_01_0762 + 6400052-6401845,6401977-6402609
          Length = 808

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +2

Query: 185 VKSSKINRHHELPSNALHSTTLRHMLSLNMSSSCSGYSVLQTGTQQ 322
           + +S +   H L ++A   T LRH +S N  +  +  S+L  GT++
Sbjct: 399 IANSSLKVVHHLITHAAPGTRLRHEISSNKQAVTNLQSILDLGTEE 444


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,740,911
Number of Sequences: 37544
Number of extensions: 365436
Number of successful extensions: 747
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)