Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19k22
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical...    29   2.8  
Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z49888-4|CAH60776.1|  742|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z49888-3|CAA90063.2|  759|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AL132862-21|CAB70232.1|  476|Caenorhabditis elegans Hypothetical...    28   6.4  
Z46381-9|CAI58660.1|  807|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z46381-8|CAA86517.2|  808|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protei...    27   8.4  
AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal chem...    27   8.4  

>AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical
           protein Y102A5C.27 protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 502 NGISPIKDEKLEYKCNISSFLARNCIFTSLPFKTSVPEYC 383
           N I+PI D   E+   +    +  C+ T++  K + PE C
Sbjct: 163 NAITPISDSVYEFNSIVQPADSEGCVKTTITCKKASPEAC 202


>Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical
           protein K07A12.2 protein.
          Length = 961

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = +3

Query: 324 NGEENMTISQVTNGISEIVQQYSGTEVLNGSDVKIQ 431
           NGE+  TI+Q T G S+I + +    +LNG+DVKI+
Sbjct: 44  NGEDVKTIAQ-TVGTSQIDELH----ILNGTDVKIE 74


>Z49888-4|CAH60776.1|  742|Caenorhabditis elegans Hypothetical
           protein F47A4.3b protein.
          Length = 742

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 126 DSVALNLPVITDKNMFLLPKALSGGDSFTIQGL 224
           D  + NL ++   N+F  P  L+G D+  + GL
Sbjct: 406 DMTSKNLAIVWSPNLFRPPPTLNGADTHLLSGL 438


>Z49888-3|CAA90063.2|  759|Caenorhabditis elegans Hypothetical
           protein F47A4.3a protein.
          Length = 759

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 126 DSVALNLPVITDKNMFLLPKALSGGDSFTIQGL 224
           D  + NL ++   N+F  P  L+G D+  + GL
Sbjct: 423 DMTSKNLAIVWSPNLFRPPPTLNGADTHLLSGL 455


>AL132862-21|CAB70232.1|  476|Caenorhabditis elegans Hypothetical
           protein Y73F8A.26 protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 483 KMKNLNINATYHLFLLETVFSHHCHLKLQFQSTVAQ 376
           K+  +N +   HLF     + H CH K+Q  +  AQ
Sbjct: 260 KLARINGHYVGHLFAAHFEYLHFCHFKMQRGAEAAQ 295


>Z46381-9|CAI58660.1|  807|Caenorhabditis elegans Hypothetical
           protein M01F1.4b protein.
          Length = 807

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = -3

Query: 386 LLHNFANSISYLTNCHIFFTI---RKFHINFTDDISIIRCLDSSYQRNCHHFWVILYQSL 216
           LL+ F   I +LT  +   +    R   + +  D+S +   D S   N HH  V +  ++
Sbjct: 592 LLNTFIEMIVFLTMVYYLLSASRTRWLPLQWASDLSAVTTADGSSAGNQHHITVAIEHAI 651

Query: 215 YSKAVSSTE 189
           +   V S +
Sbjct: 652 FGVFVLSAK 660


>Z46381-8|CAA86517.2|  808|Caenorhabditis elegans Hypothetical
           protein M01F1.4a protein.
          Length = 808

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = -3

Query: 386 LLHNFANSISYLTNCHIFFTI---RKFHINFTDDISIIRCLDSSYQRNCHHFWVILYQSL 216
           LL+ F   I +LT  +   +    R   + +  D+S +   D S   N HH  V +  ++
Sbjct: 593 LLNTFIEMIVFLTMVYYLLSASRTRWLPLQWASDLSAVTTADGSSAGNQHHITVAIEHAI 652

Query: 215 YSKAVSSTE 189
           +   V S +
Sbjct: 653 FGVFVLSAK 661


>AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protein
           protein.
          Length = 917

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 380 HNFANSISYLTNCHIFFTIRKFHINFTDDISIIRC 276
           H F +  S+      F TI  F IN T ++ + RC
Sbjct: 412 HTFLSHTSFTMFLTCFSTIVPFFINITSNVIVFRC 446


>AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal
           chemotaxis protein 14 protein.
          Length = 917

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 380 HNFANSISYLTNCHIFFTIRKFHINFTDDISIIRC 276
           H F +  S+      F TI  F IN T ++ + RC
Sbjct: 412 HTFLSHTSFTMFLTCFSTIVPFFINITSNVIVFRC 446


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,783,699
Number of Sequences: 27780
Number of extensions: 325774
Number of successful extensions: 1029
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)