Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19k17
         (685 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0315 - 22246879-22247643,22247722-22247862,22248509-222485...    31   1.1  
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277...    30   2.0  
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170...    29   2.6  
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132...    29   2.6  
03_05_0371 + 23570246-23570359,23570499-23570575,23570600-235706...    29   2.6  
06_03_0541 - 21944696-21944851,21944939-21945142,21945438-219474...    28   6.0  

>09_06_0315 -
           22246879-22247643,22247722-22247862,22248509-22248561,
           22248755-22248919,22249685-22249799,22249937-22250025,
           22250578-22250608
          Length = 452

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 516 NALNICRKCLMLRDGRIGIDLVVDEVEQCLQQEITTIVGGQSLLK 650
           NA ++ R C +LR+G        D +++ +Q +I    GG++ LK
Sbjct: 325 NANDVLRACRILREGCTTNKNAFDSMQEAIQHKIANAEGGENNLK 369


>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
            31227790-31228014,31228097-31228255,31228393-31228551,
            31228855-31229013,31229371-31229490,31229604-31229825
          Length = 1871

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 19/81 (23%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = +3

Query: 276  EDQXQLADRI--LGECKRVREETGERSEIMKATSDRRIEERIGDIEFNKSELQIQRKEIC 449
            + + +L++++  + E K   EE  +++ I    ++ +++   G++E  + +L+    E+ 
Sbjct: 881  QKEAELSEKLDQVNEEKEKFEELSKKATIKHLEAENQVQALQGELESARHKLE----EVE 936

Query: 450  IELEALGVYKTRLQDCLASLQ 512
             +LEALG+ +T + D L S +
Sbjct: 937  SDLEALGIRETSVLDKLKSAE 957


>12_02_0248 +
           16413295-16414394,16416511-16416762,16416839-16417055,
           16417216-16417353,16417493-16417669,16417744-16417851,
           16417925-16418392,16418493-16418570,16418673-16418756
          Length = 873

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 22/71 (30%), Positives = 37/71 (52%)
 Frame = +3

Query: 318 KRVREETGERSEIMKATSDRRIEERIGDIEFNKSELQIQRKEICIELEALGVYKTRLQDC 497
           +R RE+  ER E  +   +R  EER  + E ++ E +++RKE  +E  A     +  +  
Sbjct: 760 EREREKERERQE-WEQEKERECEERAREKEQDRKERELERKERELEKIAFEQKSSFFEVA 818

Query: 498 LASLQANALNI 530
           L ++Q   LNI
Sbjct: 819 LRAIQLK-LNI 828


>10_08_0374 -
           17312430-17312513,17312794-17313029,17313081-17313261,
           17313335-17313445,17313495-17313722,17313862-17313999,
           17314159-17314375,17314452-17314564,17314919-17314921
          Length = 436

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = +3

Query: 318 KRVREETGERSEIMKATSDRRIEERIGDIEFNKSELQIQRKEICIELEALGVYKTRLQDC 497
           +R RE+  ER E  +   +R  EER  + E ++ E +++RKE  +E  A     +  +  
Sbjct: 349 EREREKERERQE-REQEKERECEERAREKEQDRKERELERKERELEKIAFEQKSSFFEVA 407

Query: 498 LASLQ-ANALN 527
           L +L  ++ALN
Sbjct: 408 LRALSVSSALN 418


>03_05_0371 +
           23570246-23570359,23570499-23570575,23570600-23570675,
           23570761-23570892,23570945-23571412,23571513-23571590,
           23571693-23571809
          Length = 353

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 22/71 (30%), Positives = 37/71 (52%)
 Frame = +3

Query: 318 KRVREETGERSEIMKATSDRRIEERIGDIEFNKSELQIQRKEICIELEALGVYKTRLQDC 497
           +R RE+  ER E  +   +R  EER  + E ++ E +++RKE  +E  A     +  +  
Sbjct: 229 EREREKERERQE-REQEKERECEERAREKEQDRKERELERKERELEKIAFEQKSSFFEVA 287

Query: 498 LASLQANALNI 530
           L ++Q   LNI
Sbjct: 288 LRAIQLK-LNI 297


>06_03_0541 -
           21944696-21944851,21944939-21945142,21945438-21947472,
           21947644-21947720,21948289-21948477,21949188-21949448,
           21949527-21949632,21951330-21951517,21951814-21951971,
           21952015-21952840,21952947-21953210
          Length = 1487

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 305 PGRV*KSPRGDWRKIGNHEGH 367
           PG++ K+  G+W   G H GH
Sbjct: 309 PGKISKAMPGEWLSAGEHSGH 329


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,319,653
Number of Sequences: 37544
Number of extensions: 248035
Number of successful extensions: 609
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)