Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19k14
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    27   0.19 
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   9.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   9.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.6  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
 Frame = +1

Query: 391 GLRVGVENKLYSRECSKEML----YRGRIRVQIKNDDGAPVNPEFPTRESVMK---YIGE 549
           G R    +K++     +E L    +RGR  V   +++G+P +PE  +R SV +    I  
Sbjct: 284 GFRTTKSSKMFGSRFDEERLTLRIHRGRGSVHNGSNNGSPRSPESNSRCSVKREKIKISV 343

Query: 550 SIPKLKTRQNR--PVEQQPQPTNQ 615
           S P  +T   +   +E+ P   +Q
Sbjct: 344 SYPSTETLNTKCNTLERTPSKCSQ 367


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -2

Query: 310 RESFCCSNMQGKCISIFPHHCASFRDSKMLS 218
           +E +CC     K   I  HHC      K+++
Sbjct: 89  KECYCCRESYLKERHITLHHCYDADGIKLMN 119


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -2

Query: 310 RESFCCSNMQGKCISIFPHHCASFRDSKMLS 218
           +E +CC     K   I  HHC      K+++
Sbjct: 89  KECYCCRESYLKERHITLHHCYDADGIKLMN 119


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 571  RQNRPVEQQPQPTNQ 615
            +  +P +QQPQP  Q
Sbjct: 1520 QSQQPQQQQPQPQQQ 1534


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,834
Number of Sequences: 438
Number of extensions: 3675
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)