Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19k13
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0159 + 27089006-27089064,27089925-27090007,27090414-270905... 44 8e-05
03_02_0689 - 10423661-10424343,10425580-10425628 32 0.44
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 30 1.3
11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229... 29 2.3
09_02_0090 - 4147108-4147191,4147629-4147697,4148089-4148343,414... 29 3.1
09_04_0444 - 17649685-17650524 28 5.4
08_02_1019 - 23657175-23658047 28 5.4
04_04_0070 - 22509546-22509686,22509799-22509953,22510167-22510260 28 5.4
04_03_0117 - 11461460-11462755 28 5.4
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 28 7.1
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 28 7.1
12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379 27 9.4
12_01_0667 + 5674322-5674393,5674455-5675159,5676051-5676087,567... 27 9.4
11_06_0062 + 19709801-19710832,19712383-19712568,19712661-197128... 27 9.4
07_03_0534 - 19189986-19190126,19191058-19191212,19191643-191919... 27 9.4
04_03_0115 - 11428116-11429594 27 9.4
03_01_0639 - 4678993-4679034,4679880-4679945,4680040-4680150,468... 27 9.4
02_02_0479 - 10775382-10775656,10776513-10777535,10777725-107784... 27 9.4
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 27 9.4
>01_06_0159 +
27089006-27089064,27089925-27090007,27090414-27090588,
27091442-27091592,27091629-27091752,27092378-27092446,
27093197-27093291
Length = 251
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Frame = +1
Query: 415 LKPLLE-SGWKIQSNRDAIE--KEFQFKNFNEAFGFMTRVALLAEKMDHHPEWFNV-YNK 582
+K L++ GW++ + D ++ + ++ KNF + F+ VA +AE+ HHP+ V +N
Sbjct: 151 VKSLIKVGGWELATEGDILKLHRAWKVKNFVKGLEFLQLVAAVAEEEGHHPDLHLVGWNN 210
Query: 583 LQVTLSSHDVNGLSKRD 633
+++ + +H V GL+ D
Sbjct: 211 VKIDVWTHSVRGLTDND 227
>03_02_0689 - 10423661-10424343,10425580-10425628
Length = 243
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 271 HPARPVRPARTVAINRSLAAVRYASVSSTSPSKRKMADKLNQEERTTELKPLLESGWKIQ 450
HP P RP T A +R+ +RY S +MA + R ++PL++ W+ +
Sbjct: 157 HPPSPRRPTMTAAASRT-TRMRY---SDNQEGFLEMARSCTHKRRAVAVRPLVQRTWRQR 212
Query: 451 SN 456
S+
Sbjct: 213 SS 214
>06_03_1507 -
30646168-30646254,30646350-30646490,30648109-30648202,
30648445-30648509,30648934-30649176,30649442-30649499,
30649957-30650037,30650323-30650533,30650975-30651141,
30651216-30651268,30651600-30651681,30651765-30651914,
30652027-30652111,30652189-30652393,30652502-30652573,
30652911-30653456
Length = 779
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Frame = +1
Query: 238 LLSARSIAIHFHPARPVRPARTVAINRSLAAVRYASVSSTSPS--------KRKMADKLN 393
LL+ + +H HP ++P R RSL + R ++ SS+SPS + KM+ K++
Sbjct: 96 LLNPSAPLLHHHPKLQLQPRR---FTRSLLSSRTSNSSSSSPSASTSTSKMELKMSKKIS 152
Query: 394 QEERTTELKPLLESG 438
LK LL +G
Sbjct: 153 FTRIPRNLKDLLATG 167
>11_04_0365 -
16818468-16818514,16818619-16821706,16822860-16822919,
16823595-16823954
Length = 1184
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 213 NYDVCEWVFVKCTFDSDTLSPR 278
+YDVC WV+V FDS L+ +
Sbjct: 265 SYDVCVWVYVSDHFDSTNLTKK 286
>09_02_0090 -
4147108-4147191,4147629-4147697,4148089-4148343,
4148701-4148865,4149000-4149044,4149193-4149267,
4149397-4149573,4149680-4149904,4150058-4150183
Length = 406
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 265 HFHPARPVRPARTVAINRSLAAVRYASVSSTSPSKRKMADKLNQEE 402
H PAR A T A +R++A A V SPS+ + + N E
Sbjct: 133 HAPPARDFVGALTAAYSRNVAPALIAEVKKASPSRGVLREDFNPVE 178
>09_04_0444 - 17649685-17650524
Length = 279
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 340 ASVSSTSPSKRKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEF 480
A S + K++ K QE++ L GW+IQ + +A ++F
Sbjct: 206 AGPSGSGSGKKRFRTKFTQEQKDKMLAFAERVGWRIQKHDEAAVQQF 252
>08_02_1019 - 23657175-23658047
Length = 290
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 340 ASVSSTSPSKRKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEF 480
A S + K++ K QE++ L GW+IQ + +A ++F
Sbjct: 217 AGPSGSGSGKKRFRTKFTQEQKDKMLAFAERLGWRIQKHDEAAVQQF 263
>04_04_0070 - 22509546-22509686,22509799-22509953,22510167-22510260
Length = 129
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 385 KLNQEERTTELKPLLESG-WKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEKMD 549
K+ + T EL L G WK+ +N++ ++ +FK+ A +T AL + D
Sbjct: 63 KVEDIDYTAELLVLASDGLWKVMNNQEVVDVAKRFKDPQAAAKQLTAEALKRDSKD 118
>04_03_0117 - 11461460-11462755
Length = 431
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 226 ANGYLLSARSIAIHFHPARPVRPARTVAINRSLAAVRYASVSST 357
A G+ + S+A H H A+P V+ R++ +R S S T
Sbjct: 16 AQGHFSAFLSLAAHLHDAQPTADISIVSTPRNVEGLRRRSSSQT 59
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 367 KRKMADKLNQEERTTELKPLLESGWK 444
+R A+KL E+R + + + ESGWK
Sbjct: 779 ERANAEKLRLEQRQRQARKMQESGWK 804
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 343 SVSSTSPSKRKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEFQFK 489
++ +T K K+ADKL EE+ + L E+ + N+ A ++E++ K
Sbjct: 577 NMKNTVGDKDKLADKLESEEKEKVEEALKEALEWLDENQTAEKEEYEEK 625
>12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379
Length = 881
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/76 (22%), Positives = 30/76 (39%)
Frame = +1
Query: 394 QEERTTELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEKMDHHPEWFNV 573
Q+ + LK L S ++ + + K + +LLA K D +W V
Sbjct: 343 QDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPLAIICLASLLASKSDTKDQWEQV 402
Query: 574 YNKLQVTLSSHDVNGL 621
+N L SS ++ +
Sbjct: 403 HNSLSSAFSSQGMSDI 418
>12_01_0667 +
5674322-5674393,5674455-5675159,5676051-5676087,
5676238-5676335,5676452-5676475
Length = 311
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +1
Query: 274 PARPVRPARTVAINRSLAAVRYASVSSTSPSKRKMADKLNQEERTTELKPLLESGWKIQS 453
P R V P + + S A A + ++++ K E++ L E GW++Q
Sbjct: 181 PTRMVMPLSAMHTSESDDAA--ARPGGGAAARKRFRTKFTAEQKARMLGFAEEVGWRLQK 238
Query: 454 NRDAIEKEF 480
DA+ + F
Sbjct: 239 LEDAVVQRF 247
>11_06_0062 +
19709801-19710832,19712383-19712568,19712661-19712867,
19712940-19713078,19713172-19713380,19713520-19714134
Length = 795
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 364 SKRKMADKLNQ-EERTTELKPLLESGWKIQSNRDAIEKEFQFK 489
SK ++ D E+ T L L+E+G+ +QS + + K QFK
Sbjct: 654 SKLRITDSTKIFEKHNTTLNYLVENGFNVQSLQCKLNKALQFK 696
>07_03_0534 -
19189986-19190126,19191058-19191212,19191643-19191928,
19192641-19192892,19193839-19193877
Length = 290
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 ERTTELKPLLESG-WKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEKMD 549
+ T+ L G WK+ SN++A+++ FK+ A +T A+ + D
Sbjct: 229 DENTDFLILASDGLWKVMSNQEAVDEIKDFKDAQAAAKHLTEQAVNRKSKD 279
>04_03_0115 - 11428116-11429594
Length = 492
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 226 ANGYLLSARSIAIHFHPARPVRPARTVAINRSLAAVRYASVSST 357
A G+ + S+A H H A+P V+ R++ +R S S T
Sbjct: 16 AQGHFSAFLSLAAHLHDAQPTADITIVSTPRNVEDLRRRSSSQT 59
>03_01_0639 -
4678993-4679034,4679880-4679945,4680040-4680150,
4680266-4680304,4680394-4680493,4680597-4680712,
4680897-4681035,4681151-4681222,4681331-4681434,
4681616-4681867
Length = 346
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +2
Query: 320 ALPPSVTPVCPRHHRVKGKWLINLIKRSAQLSSNLYWNL 436
+LP + T +C V GKW+++ + ++ +++S+L +NL
Sbjct: 305 SLPSACTVLCALTLPV-GKWVVDYVLKNHEVTSDLTYNL 342
>02_02_0479 -
10775382-10775656,10776513-10777535,10777725-10778461,
10779008-10779155,10779331-10779856
Length = 902
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 514 MTRVALLAEKMDHHPEWFNVYNKLQVTL-SSHDVNGLSK 627
+T +LLA K + EW+ VYN + L +S DV + K
Sbjct: 324 ITMASLLACKARNKMEWYKVYNSVGTGLENSLDVKNMRK 362
>01_06_0293 -
28254673-28254878,28255189-28255306,28255767-28255961,
28256701-28256800,28256887-28256972,28257078-28257239,
28257965-28258101,28258233-28258281,28258688-28258746,
28258862-28258896,28259384-28259433,28260173-28260332,
28260898-28260963,28261065-28261162,28261649-28261696,
28262114-28262242,28262667-28262769,28262858-28262954,
28263181-28263241,28263659-28263740,28263845-28263962,
28264039-28266325
Length = 1481
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 319 SLAAVRYASVSSTSPSKR--KMADKLNQEERTTELKPLLESGWKIQS 453
+L A+R S S KR ADK ++ R+T KPL ES + QS
Sbjct: 560 NLNAMRMKSNLSKRERKRGSNSADKPKKKGRSTAFKPLTESSGRKQS 606
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,653,474
Number of Sequences: 37544
Number of extensions: 291340
Number of successful extensions: 769
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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