Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19k13
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098993-8|AAC67465.2| 142|Caenorhabditis elegans Pterin carbin... 128 2e-30
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 31 0.91
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 31 0.91
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 31 0.91
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 29 2.1
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 6.4
U29535-17|AAK31454.1| 295|Caenorhabditis elegans Hypothetical p... 28 6.4
M11498-1|AAA28163.1| 282|Caenorhabditis elegans protein ( C.ele... 27 8.5
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 27 8.5
>AF098993-8|AAC67465.2| 142|Caenorhabditis elegans Pterin
carbinolamine dehydrataseprotein 1 protein.
Length = 142
Score = 128 bits (310), Expect = 2e-30
Identities = 57/88 (64%), Positives = 66/88 (75%)
Frame = +1
Query: 370 RKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEKMD 549
RK L + ERT +L L +GWK+ RDAI+KEF FK+FNEAFGFMTRV L AEKMD
Sbjct: 42 RKKMPLLTESERTEQLSGLKTAGWKLVEGRDAIQKEFHFKDFNEAFGFMTRVGLKAEKMD 101
Query: 550 HHPEWFNVYNKLQVTLSSHDVNGLSKRD 633
HHPEWFNVYNK+ +TLS+HD GLS D
Sbjct: 102 HHPEWFNVYNKVDITLSTHDCGGLSPND 129
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 30.7 bits (66), Expect = 0.91
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 412 ELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEK----MDHHPEWFNVYN 579
E+K L ++ +++A+EKE Q F E + T +L AE M E N +
Sbjct: 132 EIKKLTNEQASLRHSKEALEKEIQGIQF-ERQKYATERSLHAESKTWLMQEVSERDNKVS 190
Query: 580 KLQVTLSSHDVNGLSKR 630
L++ LS+ D+ G ++R
Sbjct: 191 SLRLELSNKDIQGANER 207
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 30.7 bits (66), Expect = 0.91
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 412 ELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEK----MDHHPEWFNVYN 579
E+K L ++ +++A+EKE Q F E + T +L AE M E N +
Sbjct: 132 EIKKLTNEQASLRHSKEALEKEIQGIQF-ERQKYATERSLHAESKTWLMQEVSERDNKVS 190
Query: 580 KLQVTLSSHDVNGLSKR 630
L++ LS+ D+ G ++R
Sbjct: 191 SLRLELSNKDIQGANER 207
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 30.7 bits (66), Expect = 0.91
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 412 ELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTRVALLAEK----MDHHPEWFNVYN 579
E+K L ++ +++A+EKE Q F E + T +L AE M E N +
Sbjct: 132 EIKKLTNEQASLRHSKEALEKEIQGIQF-ERQKYATERSLHAESKTWLMQEVSERDNKVS 190
Query: 580 KLQVTLSSHDVNGLSKR 630
L++ LS+ D+ G ++R
Sbjct: 191 SLRLELSNKDIQGANER 207
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = +1
Query: 286 VRPARTVAINRSLAAVRYASVSSTSPSKRKMADKLNQEERTTELKPLLESGWKIQSNRDA 465
+RP+ +NR AV+ + + S K K +K NQ+ T N++
Sbjct: 457 MRPSDDELLNRQPIAVQASYIDDESDGKLKNEEKQNQQNATQPPYCYTNQNPTPYQNQNQ 516
Query: 466 IEKEFQFKNF 495
I+ + Q+ N+
Sbjct: 517 IQNQNQYSNY 526
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 388 LNQEERTTELKPLLESGWKIQSNRDAIEKEF-QFKNFNE 501
L Q ER +K + +GWK+ N+DAI + QF +E
Sbjct: 5162 LAQPERREIVKQIESNGWKLLPNQDAISVFYTQFMETHE 5200
>U29535-17|AAK31454.1| 295|Caenorhabditis elegans Hypothetical
protein C25H3.10a protein.
Length = 295
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 111 IYKTTHGEITLIKVPPTYLCCEVTKIETTVAMLKC 7
I KT I +K+ + + C+VTK+E +A L C
Sbjct: 109 IQKTNFTRIDCLKLGSSKVECDVTKLENCMASLVC 143
>M11498-1|AAA28163.1| 282|Caenorhabditis elegans protein (
C.elegans vitellogenin4 (yp170A) gene. ).
Length = 282
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 310 INRSLAAVRYASVSSTSPSKRKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEFQFK 489
I+ L ++Y++ + + L Q E + ELK LLE ++ Q R+ + E QF
Sbjct: 68 IHLQLIDIQYSASHIPQSEQWPKIESLEQRELSDELKELLELPFRAQI-RNGLVSEIQFS 126
Query: 490 N 492
+
Sbjct: 127 S 127
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 310 INRSLAAVRYASVSSTSPSKRKMADKLNQEERTTELKPLLESGWKIQSNRDAIEKEFQFK 489
I+ L ++Y++ + + L Q E + ELK LLE ++ Q R+ + E QF
Sbjct: 68 IHLQLIDIQYSASHIPQSEQWPKIESLEQRELSDELKELLELPFRAQI-RNGLVSEIQFS 126
Query: 490 N 492
+
Sbjct: 127 S 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,919,020
Number of Sequences: 27780
Number of extensions: 275258
Number of successful extensions: 748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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