Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19k09
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64843-12|AAL08039.1|  492|Caenorhabditis elegans Hypothetical p...    30   1.6  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    30   1.6  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    30   1.6  
U80843-6|AAB37971.1|  345|Caenorhabditis elegans Skn-1 dependent...    29   2.8  
Z81094-4|CAB03152.1|  528|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z93380-2|CAB07596.1|  340|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z74474-2|CAA98955.1|  425|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AF025450-3|AAB70932.1|  331|Caenorhabditis elegans Hypothetical ...    27   8.5  

>U64843-12|AAL08039.1|  492|Caenorhabditis elegans Hypothetical
           protein K06C4.9 protein.
          Length = 492

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 244 RSILHLSNSLLIMQRASTLLCNLLFKTEF 330
           R I H+SN LL++  AST+   L+F T++
Sbjct: 413 RVIHHISNLLLVIYSASTVFIYLIFSTKY 441


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -1

Query: 317   KSKLQSKVDALCIMSKELDKCSMERDKYKVLVEHLKSKKVVSSKIAEN 174
             KS+ + K     +  K++D+ S   +     VE  K+KKVV  K+AEN
Sbjct: 15043 KSESEQKSAEEIVAEKQVDQ-SQASESTTEAVEEKKTKKVVKKKVAEN 15089


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -1

Query: 317   KSKLQSKVDALCIMSKELDKCSMERDKYKVLVEHLKSKKVVSSKIAEN 174
             KS+ + K     +  K++D+ S   +     VE  K+KKVV  K+AEN
Sbjct: 15043 KSESEQKSAEEIVAEKQVDQ-SQASESTTEAVEEKKTKKVVKKKVAEN 15089


>U80843-6|AAB37971.1|  345|Caenorhabditis elegans Skn-1 dependent
           zygotic transcriptprotein 4 protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -1

Query: 257 CSMERDKYKVLVEHLKSKKVVSSKIAENNNAYRFTPTNTISNGDMF-AQTKDHNNMLKV- 84
           C + ++  K++  H+K  K+    I  N + Y+FT  NT  NG +     +D  ++  + 
Sbjct: 31  CPLIKNLEKLVHLHIKYLKLTDHSITINKDTYQFTVHNT-KNGFLHDIDERDELDLSPIH 89

Query: 83  -EVNEYVLKGNDKIKTYY 33
            + NE ++     I+ Y+
Sbjct: 90  EDPNELIIDVRKNIRWYF 107


>Z81094-4|CAB03152.1|  528|Caenorhabditis elegans Hypothetical
           protein F58G11.6 protein.
          Length = 528

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = -1

Query: 209 SKKVVSSKIAENNNAYRFTPTNTISNGDMFAQTKDHNNMLKVEVNE 72
           S++ +S +I+EN + + F    T     ++ +T+D   +L V +++
Sbjct: 86  SRREISERISENEDGFDFRTVTTQRTEHVYIRTEDDQFILGVSISK 131


>Z93380-2|CAB07596.1|  340|Caenorhabditis elegans Hypothetical
           protein F28C12.2 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 23/92 (25%), Positives = 44/92 (47%)
 Frame = +1

Query: 37  YVFILSFPFNTYSFTSTFSMLLWSLVCANISPLLIVLVGVNL*ALLFSAILEETTFLDFR 216
           ++FI++    +Y FT      LW     + S  LI++V       L ++++ +TT L+  
Sbjct: 31  FIFIITVVLISYCFTWLAIQALWKHNIFSNSTRLILIV------CLLNSVVHQTTMLE-- 82

Query: 217 CSTRTLYLSRSILHLSNSLLIMQRASTLLCNL 312
             TR     RS+++ S    ++ R+S  +  L
Sbjct: 83  --TRITQAYRSVVYDSEPCKLLFRSSDCVFEL 112


>Z74474-2|CAA98955.1|  425|Caenorhabditis elegans Hypothetical
           protein K10C8.2 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/66 (25%), Positives = 33/66 (50%)
 Frame = +1

Query: 139 IVLVGVNL*ALLFSAILEETTFLDFRCSTRTLYLSRSILHLSNSLLIMQRASTLLCNLLF 318
           ++LV +    LLF+ I   T  ++         L   ++ LS  L+ +  AST++  L+F
Sbjct: 296 VMLVAITTEFLLFNLIAFATNIIELSSIRFFADLETLLVELSTFLVNVNGASTIIIYLIF 355

Query: 319 KTEF*N 336
            +++ N
Sbjct: 356 GSKYRN 361


>AF025450-3|AAB70932.1|  331|Caenorhabditis elegans Hypothetical
           protein C41H7.4 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 317 KSKLQSKVDALCIMSKELDKCSMERD 240
           KS L+ K+ A+CI  K+LD+ + E+D
Sbjct: 103 KSVLKKKI-AICIRDKKLDRAATEKD 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,156,047
Number of Sequences: 27780
Number of extensions: 263761
Number of successful extensions: 754
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)