Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19k05
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067781-1|AAH67781.1|  310|Homo sapiens EDG8 protein protein.         31   4.7  
BC101789-1|AAI01790.1|  366|Homo sapiens apolipoprotein A-V prot...    30   8.2  
BC101787-1|AAI01788.1|  366|Homo sapiens apolipoprotein AV protein.    30   8.2  
AY555191-1|AAS68229.1|  366|Homo sapiens apolipoprotein A-V prot...    30   8.2  
AY422949-1|AAQ91808.1|  366|Homo sapiens apolipoprotein A-V prot...    30   8.2  
AY358749-1|AAQ89109.1|  274|Homo sapiens APOA5 protein.                30   8.2  
AF202890-1|AAF25662.1|  363|Homo sapiens apolipoprotein A5 protein.    30   8.2  
AF202889-1|AAF25661.1|  363|Homo sapiens apolipoprotein A5 protein.    30   8.2  

>BC067781-1|AAH67781.1|  310|Homo sapiens EDG8 protein protein.
          Length = 310

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 23/55 (41%), Positives = 30/55 (54%)
 Frame = +3

Query: 129 PSFFWNCLALQDDCPFYSSIDPKLYYFAVGLTCIYAAFFVIILADLQFYWSLDGL 293
           P+  WNCL   D C   S++ P LY  A  L C+ A  FV ILA +   ++L GL
Sbjct: 169 PALGWNCLGRLDAC---STVLP-LYAKAYVLFCVLA--FVGILAAICALYALAGL 217


>BC101789-1|AAI01790.1|  366|Homo sapiens apolipoprotein A-V
           protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 276 WSLDGLQQKIDYYS-NLVRKKVRRVQMNQQRLVSTQERTEKQL 401
           W+L+GL+Q++  Y+ +L+ +   RVQ  Q++L    E T+ QL
Sbjct: 120 WNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQL 162


>BC101787-1|AAI01788.1|  366|Homo sapiens apolipoprotein AV protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 276 WSLDGLQQKIDYYS-NLVRKKVRRVQMNQQRLVSTQERTEKQL 401
           W+L+GL+Q++  Y+ +L+ +   RVQ  Q++L    E T+ QL
Sbjct: 120 WNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQL 162


>AY555191-1|AAS68229.1|  366|Homo sapiens apolipoprotein A-V
           protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 276 WSLDGLQQKIDYYS-NLVRKKVRRVQMNQQRLVSTQERTEKQL 401
           W+L+GL+Q++  Y+ +L+ +   RVQ  Q++L    E T+ QL
Sbjct: 120 WNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQL 162


>AY422949-1|AAQ91808.1|  366|Homo sapiens apolipoprotein A-V
           protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 276 WSLDGLQQKIDYYS-NLVRKKVRRVQMNQQRLVSTQERTEKQL 401
           W+L+GL+Q++  Y+ +L+ +   RVQ  Q++L    E T+ QL
Sbjct: 120 WNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQL 162


>AY358749-1|AAQ89109.1|  274|Homo sapiens APOA5 protein.
          Length = 274

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 276 WSLDGLQQKIDYYS-NLVRKKVRRVQMNQQRLVSTQERTEKQL 401
           W+L+GL+Q++  Y+ +L+ +   RVQ  Q++L    E T+ QL
Sbjct: 120 WNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQL 162


>AF202890-1|AAF25662.1|  363|Homo sapiens apolipoprotein A5 protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 276 WSLDGLQQKIDYYS-NLVRKKVRRVQMNQQRLVSTQERTEKQL 401
           W+L+GL+Q++  Y+ +L+ +   RVQ  Q++L    E T+ QL
Sbjct: 117 WNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQL 159


>AF202889-1|AAF25661.1|  363|Homo sapiens apolipoprotein A5 protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 276 WSLDGLQQKIDYYS-NLVRKKVRRVQMNQQRLVSTQERTEKQL 401
           W+L+GL+Q++  Y+ +L+ +   RVQ  Q++L    E T+ QL
Sbjct: 117 WNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQL 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,236,591
Number of Sequences: 237096
Number of extensions: 1918375
Number of successful extensions: 4182
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4182
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)