Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19k04
         (735 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine re...    31   0.64 
AF022980-3|AAG24187.2|  396|Caenorhabditis elegans Serpentine re...    29   2.6  
Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical p...    29   4.5  
AF022972-2|AAC48242.1|  346|Caenorhabditis elegans Seven tm rece...    29   4.5  
AF038614-2|AAB92061.2|  321|Caenorhabditis elegans Serpentine re...    28   6.0  
Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr...    28   7.9  
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ...    28   7.9  
AF047657-12|AAK18941.3|  367|Caenorhabditis elegans Serpentine r...    28   7.9  
AF016668-6|AAB66090.1|  275|Caenorhabditis elegans Hypothetical ...    28   7.9  

>AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein6 protein.
          Length = 306

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 26/85 (30%), Positives = 42/85 (49%)
 Frame = +2

Query: 389 FFVYMTHWGLLFIVLESMFGIIVVLRKRGRPDATFGLPWYVKTYWVLYNISIPVAFLITV 568
           FF  +    +LF+V++     I+V+ K  R   TF   WY+     +  + +PV F I  
Sbjct: 90  FFETVQAMIMLFLVVD-----ILVIVKFPRFYHTFSTEWYI-----ILALILPVIFGIIF 139

Query: 569 FYWGILKSSLDTVKFSPNPVLDVMI 643
           F WG +++  + V F  NP L + I
Sbjct: 140 FIWGFIETDDEIVIFC-NPPLGLNI 163


>AF022980-3|AAG24187.2|  396|Caenorhabditis elegans Serpentine
           receptor, class w protein2 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 100 FFKFNIYLVILQFTF*NIFIVHASVLARE 14
           F KFN  + ILQF    I ++H SVL R+
Sbjct: 37  FLKFNYVIAILQFFAVAINLIHLSVLTRK 65


>Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 317 IPIFLWATISLFMSMNYFWGPTKLFFVYMTHWGLLFIVLESMFGIIVV 460
           +PI+  A I+L  + + ++   KLF ++ T   LL  +L S F I VV
Sbjct: 23  LPIYSIAIIALLQTKSPYFEKYKLFLIWHTSTNLLAELLNSWFLIPVV 70


>Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 317 IPIFLWATISLFMSMNYFWGPTKLFFVYMTHWGLLFIVLESMFGIIVV 460
           +PI+  A I+L  + + ++   KLF ++ T   LL  +L S F I VV
Sbjct: 23  LPIYSIAIIALLQTKSPYFEKYKLFLIWHTSTNLLAELLNSWFLIPVV 70


>Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 343 LTFHVDELFLGAHEAILCVYDTLGSVIHRPGIYVRYHRSTKETRKTRRYIWLALVCKNVL 522
           +T  V+EL +G    I  +Y  +  V+  P    +Y +S K+ +   R+I+  +VCKNV+
Sbjct: 116 ITNEVNELLIG----IFSIYTFI--VVFYPHAE-KYLKSKKDLKWKIRFIYFFVVCKNVV 168

Query: 523 GPLQ-YFNPG 549
             +    NPG
Sbjct: 169 TNIHTKMNPG 178


>Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 343 LTFHVDELFLGAHEAILCVYDTLGSVIHRPGIYVRYHRSTKETRKTRRYIWLALVCKNVL 522
           +T  V+EL +G    I  +Y  +  V+  P    +Y +S K+ +   R+I+  +VCKNV+
Sbjct: 116 ITNEVNELLIG----IFSIYTFI--VVFYPHAE-KYLKSKKDLKWKIRFIYFFVVCKNVV 168

Query: 523 GPLQ-YFNPG 549
             +    NPG
Sbjct: 169 TNIHTKMNPG 178


>AF022972-2|AAC48242.1|  346|Caenorhabditis elegans Seven tm
           receptor protein 112 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +2

Query: 302 PLLWRIPIFLWATISLFMSMNYFWGPTKLFFVYMTHWGLL 421
           PL+  IP+  WA++S F+  +  +    + +V  TH+ ++
Sbjct: 136 PLMCSIPVTAWASVSYFLYPDTEYTEAAVTYVLKTHYEVI 175


>AF038614-2|AAB92061.2|  321|Caenorhabditis elegans Serpentine
           receptor, class v protein4 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 368 FWGPTKLFFVYMTHWGLLFIVLESMF 445
           FW PT +  VY++ W    IVL  +F
Sbjct: 127 FWSPTLILIVYLSEWLAPTIVLIPLF 152


>Z81533-4|CAB04338.1|  280|Caenorhabditis elegans Hypothetical
           protein F36G9.7 protein.
          Length = 280

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 109 FNYFFKFNIYLVILQFTF*NIFIVHASV 26
           F  F++  +YLVIL  TF  ++++H S+
Sbjct: 143 FKVFWRIIVYLVILIGTFSALYVLHISI 170


>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
           protein K08E7.9 protein.
          Length = 1321

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 326 FLWATISLFMS--MNYFWGPTKLFFVYMTHWGLLFIVLESMFGI 451
           F++ T S+F +  MN F G    F      W L+F+VL +  GI
Sbjct: 766 FIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGI 809


>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
           protein.
          Length = 1321

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 326 FLWATISLFMS--MNYFWGPTKLFFVYMTHWGLLFIVLESMFGI 451
           F++ T S+F +  MN F G    F      W L+F+VL +  GI
Sbjct: 766 FIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGI 809


>AF047657-12|AAK18941.3|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein4 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 94  KFNIYLVILQFTF*NIFIVHASVLAREFVAT 2
           K N  L ILQF    I +VH S+L+R+ + T
Sbjct: 30  KLNFVLAILQFFGFGINLVHFSILSRKHLRT 60


>AF016668-6|AAB66090.1|  275|Caenorhabditis elegans Hypothetical
           protein F36H9.2 protein.
          Length = 275

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 548 PGLKYCRGPSTFLHT 504
           PG+KYCRG   ++HT
Sbjct: 205 PGMKYCRGHLCYVHT 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,512,658
Number of Sequences: 27780
Number of extensions: 400758
Number of successful extensions: 1024
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)