Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19j23
         (595 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124779-1|BAC85944.1|  163|Homo sapiens protein ( Homo sapiens ...    31   4.1  
AL450426-2|CAH72410.1|  318|Homo sapiens olfactory receptor, fam...    30   5.4  
AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens ...    30   5.4  
AB065714-1|BAC05935.1|  318|Homo sapiens seven transmembrane hel...    30   5.4  

>AK124779-1|BAC85944.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42789 fis, clone BRAWH3007221. ).
          Length = 163

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
 Frame = +1

Query: 19  LSVPVTFFFP----DLFLPGVRNTASKPEPLASLIMHLTVLTD-VFVASEVCFNFSISLF 183
           LSV + F F     D   P     AS   P  SL +    LT  +++A+  CF  S+SLF
Sbjct: 49  LSVSLLFLFSVSPSDHLTPLACCLASSLSPFLSLFVSSLFLTHFLYLAASPCFRLSVSLF 108

Query: 184 P 186
           P
Sbjct: 109 P 109


>AL450426-2|CAH72410.1|  318|Homo sapiens olfactory receptor, family
           13, subfamily C, member 4 protein.
          Length = 318

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 13  TKLSVPVTFFFPDL-FLPGVRNTASKPEPLASLIMHLTVLTDVFVASEVCFNFSISLFPC 189
           ++L +P+ FF  +L FL     T+S P  L SLI     ++    A ++ F F++    C
Sbjct: 53  SRLHMPMYFFLGNLSFLDICYTTSSIPSTLVSLISKKRNISFSGCAVQMFFGFAMGSTEC 112

Query: 190 FIM 198
           F++
Sbjct: 113 FLL 115


>AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39978 fis, clone SPLEN2029380. ).
          Length = 261

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 154 VCFNFSISLFPCFIMKQYTSYTNFLP 231
           +C  FS+SL PC ++    S + FLP
Sbjct: 35  ICLTFSVSLCPCIVLSACLSASLFLP 60


>AB065714-1|BAC05935.1|  318|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 318

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 13  TKLSVPVTFFFPDL-FLPGVRNTASKPEPLASLIMHLTVLTDVFVASEVCFNFSISLFPC 189
           ++L +P+ FF  +L FL     T+S P  L SLI     ++    A ++ F F++    C
Sbjct: 53  SRLHMPMYFFLGNLSFLDICYTTSSIPSTLVSLISKKRNISFSGCAVQMFFGFAMGSTEC 112

Query: 190 FIM 198
           F++
Sbjct: 113 FLL 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,439,399
Number of Sequences: 237096
Number of extensions: 1555871
Number of successful extensions: 3039
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3039
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)