Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19j23
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-34|CAA22113.1|  463|Caenorhabditis elegans Hypothetical...    31   0.47 
AL033514-33|CAB54500.1|  480|Caenorhabditis elegans Hypothetical...    31   0.47 
AF160493-1|AAD43348.1|  465|Caenorhabditis elegans DNA-binding p...    31   0.47 
AF160492-1|AAD43347.1|  463|Caenorhabditis elegans DNA-binding p...    31   0.47 
AL132863-8|CAB60576.2|  519|Caenorhabditis elegans Hypothetical ...    30   1.1  
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    29   3.3  
CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF101316-4|AAC69229.2|  296|Caenorhabditis elegans Serpentine re...    28   5.8  

>AL033514-34|CAA22113.1|  463|Caenorhabditis elegans Hypothetical
           protein Y75B8A.35b protein.
          Length = 463

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 194 IKQGNNDMEKLKQTSEATKTSVSTVRCIINEAKGSGLLAVFRT 66
           +K  NN  E+LKQT E  +  V   +   NE + +GLLA + T
Sbjct: 281 VKNRNNSKEELKQTLEMLREKVQEAK-RQNEMQENGLLAAYET 322


>AL033514-33|CAB54500.1|  480|Caenorhabditis elegans Hypothetical
           protein Y75B8A.35a protein.
          Length = 480

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 194 IKQGNNDMEKLKQTSEATKTSVSTVRCIINEAKGSGLLAVFRT 66
           +K  NN  E+LKQT E  +  V   +   NE + +GLLA + T
Sbjct: 298 VKNRNNSKEELKQTLEMLREKVQEAK-RQNEMQENGLLAAYET 339


>AF160493-1|AAD43348.1|  465|Caenorhabditis elegans DNA-binding
           protein ZIP-1 protein.
          Length = 465

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 194 IKQGNNDMEKLKQTSEATKTSVSTVRCIINEAKGSGLLAVFRT 66
           +K  NN  E+LKQT E  +  V   +   NE + +GLLA + T
Sbjct: 298 VKNRNNSKEELKQTLEMLREKVQEAK-RQNEMQENGLLAAYET 339


>AF160492-1|AAD43347.1|  463|Caenorhabditis elegans DNA-binding
           protein ZIP-1 protein.
          Length = 463

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 194 IKQGNNDMEKLKQTSEATKTSVSTVRCIINEAKGSGLLAVFRT 66
           +K  NN  E+LKQT E  +  V   +   NE + +GLLA + T
Sbjct: 281 VKNRNNSKEELKQTLEMLREKVQEAK-RQNEMQENGLLAAYET 322


>AL132863-8|CAB60576.2|  519|Caenorhabditis elegans Hypothetical
           protein Y37H2A.7 protein.
          Length = 519

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 305 FVECLLIFYKTYTMP*QTGVVLKRKGRKFVYDVY 204
           F+E L +FY  Y+ P   GV  + +G KFV   Y
Sbjct: 473 FMEILKVFYPKYSEPLPAGVRFETQGFKFVIGFY 506


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +3

Query: 183 PLFYNEAIYVVHKFSTLSFKYYTS---LSRHSVCFIKNQQT 296
           PLF+N + ++   F +  F Y+TS   LS H +  +++  T
Sbjct: 648 PLFWNNSTHLYQYFDSRGFSYFTSPNHLSAHGIELVRHIYT 688


>CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical
           protein K09E10.1 protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +3

Query: 183 PLFYNEAIYVVHKFSTLSFKYYTS---LSRHSVCFIKNQQT 296
           PLF+N + ++   F +  F Y+TS   LS H +  +++  T
Sbjct: 645 PLFWNNSTHLYQYFDSRGFSYFTSPNHLSAHGIELVRHIYT 685


>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
            F22G12.5 protein.
          Length = 2396

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 67   VRNTASKPEPLASLIMHLTVLTDVFVAS 150
            +R   S+PE LA L + L VLTD  + S
Sbjct: 1129 MRELQSEPEQLAQLYLQLWVLTDAVIKS 1156


>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
            F22G12.5 protein.
          Length = 2396

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 67   VRNTASKPEPLASLIMHLTVLTDVFVAS 150
            +R   S+PE LA L + L VLTD  + S
Sbjct: 1129 MRELQSEPEQLAQLYLQLWVLTDAVIKS 1156


>Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical
           protein F48C11.2 protein.
          Length = 708

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 22/79 (27%), Positives = 33/79 (41%)
 Frame = -3

Query: 317 LPLLFVECLLIFYKTYTMP*QTGVVLKRKGRKFVYDVYCFIIKQGNNDMEKLKQTSEATK 138
           L + + E L    K  ++P  TG+V        +Y   C    Q NN  E +  T+  + 
Sbjct: 61  LDINYEEILNYVQKQSSLPVLTGIVAGNTEIP-IYGAIC----QSNNFYEVVANTTGFSN 115

Query: 137 TSVSTVRCIINEAKGSGLL 81
           T  ST  C   +   SGL+
Sbjct: 116 TPTSTTTCAYIKTSSSGLV 134


>AF101316-4|AAC69229.2|  296|Caenorhabditis elegans Serpentine
           receptor, class sx protein8 protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +1

Query: 97  LASLIMHLTVLTDVFVASEVCFNFSISLFPCFIMKQYTSYTNFLPFL-LSTTPVCH 261
           L S I    +LTD  +  + CFN + S   C+ ++    +   L  L L   PV H
Sbjct: 57  LNSCIDVYLMLTDSVILRQTCFNITFSTVFCYCVQSTIMFFILLDILILVVFPVAH 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,930,873
Number of Sequences: 27780
Number of extensions: 262293
Number of successful extensions: 673
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)