Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19j17
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U55384-1|AAC14537.1|  496|Caenorhabditis elegans cytosolic catal...    28   5.5  
AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical p...    28   7.2  
AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical ...    28   7.2  
AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z66494-2|CAA91257.1|  821|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +1

Query: 373 PSSESTFRRTGTAGSVLATNNHNSKRPLRQLNHSNKRPPHRLNRPRRTANTSSKPRYHST 552
           P S +   R       L  +N   K+P +    S+  PP  L+   +  ++SS PR+H  
Sbjct: 729 PMSGTVADRANKFRQQLQADNEKGKKPWQHPFMSSNVPPSSLSAREQLFSSSSLPRHHRN 788

Query: 553 DS 558
            S
Sbjct: 789 SS 790


>U55384-1|AAC14537.1|  496|Caenorhabditis elegans cytosolic catalase
           protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 382 ESTFRRTGTAGSVLATNNHNSKRP 453
           ESTF+ TG  GS+   ++HN ++P
Sbjct: 414 ESTFQTTGDVGSLWTGDDHNYEQP 437


>AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical
           protein Y76B12C.2 protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 487 PHRLNRPRRTANTSSKPRYHSTDSETQ 567
           P+R++RPRR+  T+ K  Y  +D + +
Sbjct: 207 PNRISRPRRSVTTAKKVSYVPSDDQLE 233


>Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 376 SSESTFRRTGTAGSVLATNNHNSKRPLRQLNHSNKRPPHRLNRPRRTANTSSKPRYHST 552
           S +S+FR   +  S +      S  P ++L+   K  P   N PR T ++SSK   ++T
Sbjct: 127 SKQSSFRSANSTASSVGRGRPVSSTPNKRLSPVYKPSPVPKNTPRTT-SSSSKTTINTT 184


>U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical
           protein C37C3.1 protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 379 SESTFRRTGTAGSVLATNNHNSKRPLRQ-LNHSNKRPPHRLNRPRRTANTSSKPRYHST 552
           SEST RR     S   + +   KRP+R+  + S  R P+R N  R  + T S+ +  ST
Sbjct: 335 SESTSRRRSGRHSRSRSRSPPRKRPVRRSRSRSRSRTPNR-NWTRARSRTRSQAKSSST 392


>AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical
           protein Y53C10A.4 protein.
          Length = 908

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 579 QKSPADPSLVDADDRTHRSMSAPPDTPNQTK 671
           QK+P    L DADD T +S  A  D P++ +
Sbjct: 473 QKTPIIEELNDADDATSQSSLAESDLPDEPR 503


>AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 376 SSESTFRRTGTAGSVLATNNHNSKRPLRQLNHSNKRPPHRLNRPRRTANTSSKPRYHST 552
           S +S+FR   +  S +      S  P ++L+   K  P   N PR T ++SSK   ++T
Sbjct: 127 SKQSSFRSANSTASSVGRGRPVSSTPNKRLSPVYKPSPVPKNTPRTT-SSSSKTTINTT 184


>Z66494-2|CAA91257.1|  821|Caenorhabditis elegans Hypothetical
           protein C34C6.2 protein.
          Length = 821

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/63 (23%), Positives = 28/63 (44%)
 Frame = +1

Query: 376 SSESTFRRTGTAGSVLATNNHNSKRPLRQLNHSNKRPPHRLNRPRRTANTSSKPRYHSTD 555
           +S  T   TGT+ +   ++     + +  +N  ++ P HR      + N S++ RY    
Sbjct: 506 ASGKTSTATGTSSTHTISSEIRRDQRIMSVNDRSRDPSHRTVSVTDSVNISNQSRYSEQT 565

Query: 556 SET 564
           S T
Sbjct: 566 SST 568


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,476,660
Number of Sequences: 27780
Number of extensions: 219296
Number of successful extensions: 770
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)