Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19j13
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46934-4|CAA87042.3|  519|Caenorhabditis elegans Hypothetical pr...    37   0.009
Z95623-2|CAB09134.1|  509|Caenorhabditis elegans Hypothetical pr...    32   0.34 
Z48717-9|CAA88611.1|  509|Caenorhabditis elegans Hypothetical pr...    32   0.34 
U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical pr...    31   0.59 
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr...    31   0.59 
Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z99283-5|CAE46680.1|  308|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z99283-4|CAB16534.1|  342|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AC024201-16|AAF36025.1|  192|Caenorhabditis elegans Hypothetical...    28   5.5  
AC024201-15|AAF36024.1|  220|Caenorhabditis elegans Hypothetical...    28   5.5  
U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z72515-3|CAA96683.2|  330|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z46934-4|CAA87042.3|  519|Caenorhabditis elegans Hypothetical
           protein ZK1320.4 protein.
          Length = 519

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
 Frame = +3

Query: 261 YWLLRNVPYREPCPLFGNFGATFTMRRSYTKMLQF-FYDNYYNEKYVGIFQARRPTLMLI 437
           YW  R +P     PL G+F    T++  Y + LQ   +   Y   Y G  +    TL++ 
Sbjct: 25  YWRRRGIPGPLGYPLVGSFPK--TLKSEYPQYLQIRDWTKLYGPIY-GYTEGTIKTLIVS 81

Query: 438 DLELXKNVLSKEFPNFSDR-ISVTTDTQREPLLRNLANMSGAEWKAM 575
           D+++ + +  +++ NF  R ++       +    NL +  G  WK +
Sbjct: 82  DIDIVRQIFVEQYDNFYGRKLNPIQGDPEKDERTNLFSAQGFRWKRL 128


>Z95623-2|CAB09134.1|  509|Caenorhabditis elegans Hypothetical
           protein T10B9.4 protein.
          Length = 509

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
 Frame = +3

Query: 261 YWLLRNVPYREPCPLFGNFGATFTMRRSYTKMLQFFYDNYYNEKYVGIFQARRPTLMLID 440
           +W  R +P     P+FG  GA           LQ +   Y   K  G  +  +  +++ D
Sbjct: 20  FWKRRGLPGPWGVPIFGKAGAMLEDSFPPGYTLQKWTKEY--GKIYGFTEGMQKVMVISD 77

Query: 441 LELXKNVLSKEFPNFSDR--ISVTTDTQREPLLRNLANMSGAEWKAM 575
            +L + +L K++ NF  R    V  D  ++  + ++    G  WK +
Sbjct: 78  PDLVQEILVKQYDNFYGRKHNPVQGDPDKDKDI-HIVGAQGFRWKRL 123


>Z48717-9|CAA88611.1|  509|Caenorhabditis elegans Hypothetical
           protein T10B9.4 protein.
          Length = 509

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
 Frame = +3

Query: 261 YWLLRNVPYREPCPLFGNFGATFTMRRSYTKMLQFFYDNYYNEKYVGIFQARRPTLMLID 440
           +W  R +P     P+FG  GA           LQ +   Y   K  G  +  +  +++ D
Sbjct: 20  FWKRRGLPGPWGVPIFGKAGAMLEDSFPPGYTLQKWTKEY--GKIYGFTEGMQKVMVISD 77

Query: 441 LELXKNVLSKEFPNFSDR--ISVTTDTQREPLLRNLANMSGAEWKAM 575
            +L + +L K++ NF  R    V  D  ++  + ++    G  WK +
Sbjct: 78  PDLVQEILVKQYDNFYGRKHNPVQGDPDKDKDI-HIVGAQGFRWKRL 123


>U20864-7|AAK68357.1|  859|Caenorhabditis elegans Hypothetical
           protein F32A5.2b protein.
          Length = 859

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 339 RSYTKMLQFFYDNYYNEKYVGIFQARRPTLMLIDLELXKNVLSKEFPNFS 488
           R YT++L   YDN  +E    +F   RP+   I   L  +  S E P+++
Sbjct: 344 RPYTRLLPTIYDNEVSEPVGSLFTDARPSPREITRRLTSSQASVESPDYN 393


>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
           protein F32A5.2a protein.
          Length = 1000

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 339 RSYTKMLQFFYDNYYNEKYVGIFQARRPTLMLIDLELXKNVLSKEFPNFS 488
           R YT++L   YDN  +E    +F   RP+   I   L  +  S E P+++
Sbjct: 485 RPYTRLLPTIYDNEVSEPVGSLFTDARPSPREITRRLTSSQASVESPDYN 534


>Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.2 protein.
          Length = 502

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 381 YNEKYVGIFQARRPTLMLIDLELXKNVLSKEFPNFSDRI 497
           Y E + GI+   +  ++L + E  K V  K F NFSDRI
Sbjct: 74  YGETF-GIYFGAQMNIVLSNEEDIKEVFIKNFSNFSDRI 111


>Z99283-5|CAE46680.1|  308|Caenorhabditis elegans Hypothetical
           protein Y70C5C.6b protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 423 TLMLIDLELXKNVLSKEFPNFSDRISVTTDTQREPLLRN 539
           + +L DLEL   ++SK FP     + V  D  R+ LLRN
Sbjct: 100 SFVLRDLELTWRMVSKAFPT----VEVLEDRDRQALLRN 134


>Z99283-4|CAB16534.1|  342|Caenorhabditis elegans Hypothetical
           protein Y70C5C.6a protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 423 TLMLIDLELXKNVLSKEFPNFSDRISVTTDTQREPLLRN 539
           + +L DLEL   ++SK FP     + V  D  R+ LLRN
Sbjct: 134 SFVLRDLELTWRMVSKAFPT----VEVLEDRDRQALLRN 168


>Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.1 protein.
          Length = 502

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +3

Query: 381 YNEKYVGIFQARRPTLMLIDLELXKNVLSKEFPNFSDRISVTTDTQREPLLRN-LANMSG 557
           Y E + GI+   +  +++ + +  K V  K F NFSDR SV +  +   L  + L N   
Sbjct: 74  YGETF-GIYYGSQMNIVISNEKDIKEVFIKNFSNFSDR-SVPSIYEANQLTASLLMNSYS 131

Query: 558 AEWK 569
           + WK
Sbjct: 132 SGWK 135


>AC024201-16|AAF36025.1|  192|Caenorhabditis elegans Hypothetical
           protein Y71F9B.13b protein.
          Length = 192

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 339 RSYTKMLQFFYDNYYNEKYVGIFQARRPTLMLID 440
           R Y +   ++Y NYY   Y+G F  R  ++  ++
Sbjct: 69  RDYGQFGNWYYPNYYPPTYLGFFDGRPASMAQLE 102


>AC024201-15|AAF36024.1|  220|Caenorhabditis elegans Hypothetical
           protein Y71F9B.13a protein.
          Length = 220

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 339 RSYTKMLQFFYDNYYNEKYVGIFQARRPTLMLID 440
           R Y +   ++Y NYY   Y+G F  R  ++  ++
Sbjct: 97  RDYGQFGNWYYPNYYPPTYLGFFDGRPASMAQLE 130


>U23449-6|AAC24300.2|  937|Caenorhabditis elegans Hypothetical
           protein K06A1.6 protein.
          Length = 937

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 15  TPRCVGEDSGPRISQRMLACILFTN 89
           T  C G D  PRI +  L CILF N
Sbjct: 631 TLECDGVDVTPRIKELKLHCILFHN 655


>Z72515-3|CAA96683.2|  330|Caenorhabditis elegans Hypothetical
           protein T11A5.3 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 263 LVVTKCTLQRTMSVIWKFWSNVHYEEKLHKNVAIFLR 373
           LV+T C +   +   WK WS + Y +  H N  I ++
Sbjct: 26  LVITICAVPVLIWATWKLWS-MKYTKLFHVNFKIIIQ 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,410,878
Number of Sequences: 27780
Number of extensions: 234607
Number of successful extensions: 500
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)