Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19j10
         (706 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81589-2|CAB04724.1|  728|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z75547-14|CAA99901.2|  461|Caenorhabditis elegans Hypothetical p...    28   7.5  
Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z66512-8|CAA91324.2|  349|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AL023835-13|CAA19497.4|  304|Caenorhabditis elegans Hypothetical...    28   7.5  
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z81589-2|CAB04724.1|  728|Caenorhabditis elegans Hypothetical
           protein T08G5.2 protein.
          Length = 728

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 429 FKFI*MKTHLVTIVLIVKMGLTLFDYPWHLFLRPQLQKKSENVTR-KRNRKLFVSGWRAR 605
           FKF   + H   I L + +  + +    H   RPQ+Q + E + +  R R +      AR
Sbjct: 257 FKFSTAELHFKNIFLKIPVDKSAWQISLHNPERPQIQMEFEIIFKHARFRNVKYRAIFAR 316

Query: 606 SKKNAKRR 629
           SK+N  RR
Sbjct: 317 SKENEDRR 324


>Z75547-14|CAA99901.2|  461|Caenorhabditis elegans Hypothetical
           protein R11D1.7 protein.
          Length = 461

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 312 VTSSTQEPVCSDVTECVASIFST*MAGLMYLVLLFLDATES 190
           +   T E V S +  C+  +F+T    ++YL +L L A ES
Sbjct: 60  IDKQTDEQVASHM--CLFEVFATLFVNIIYLSMLHLSAVES 98


>Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical
           protein C11H1.3 protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 119 DCELKRYNHVFDEAGENTHYHSDSDSVASRKSKTR 223
           DCE K+     D+  ++   HSD DSV + +   R
Sbjct: 469 DCESKKSEESEDDERKSQAAHSDDDSVTANEDSAR 503


>Z66512-8|CAA91324.2|  349|Caenorhabditis elegans Hypothetical
           protein F52H3.4 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/67 (23%), Positives = 24/67 (35%)
 Frame = +2

Query: 152 DEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTPHPHSD 331
           + A EN+    D  SV   K+ TR+I P      I +           C D  + +    
Sbjct: 69  ENADENSKNKEDPQSVVKEKTTTRFIKPKSEYVSISSDSESEEDSDSECSDSDSVNEFFA 128

Query: 332 YRSNSTP 352
           Y+    P
Sbjct: 129 YKPPEAP 135


>AL023835-13|CAA19497.4|  304|Caenorhabditis elegans Hypothetical
           protein Y37A1B.15 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 386 LKIHSNPVHLRMGSNYSCNRCVGAE*RHQHKNPSAVTSLNALLQSFQRKW 237
           LKI SN   +  G N  CN C+ AE  H  +       +  L ++F RKW
Sbjct: 29  LKIWSNTEIVLAGGNVICNLCI-AEKSHAVQFDRKY-MIKTLSKTFSRKW 76


>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
           protein C49C3.4 protein.
          Length = 1566

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 305 HQHKNPSAVTSLNALLQSFQRKW 237
           H   NP+A  +LN++  SF R W
Sbjct: 411 HVESNPTAQITLNSISASFDRSW 433


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 534  LQKKSENVTRKRNRKLFVSGWRARSKKNAKRRVWK 638
            L+ KS+ + R    KL  + WR ++++N ++  WK
Sbjct: 899  LEMKSQ-LLRIEREKLMQTSWRQQTQENEEKETWK 932


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,147,683
Number of Sequences: 27780
Number of extensions: 330556
Number of successful extensions: 1099
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)