Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19j02
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ264729-1|ABB72674.1| 1132|Homo sapiens telomerase reverse tran... 31 2.6
AY007685-1|AAG23289.1| 1132|Homo sapiens telomerase catalytic su... 31 2.6
AF128894-1|AAD30037.1| 1132|Homo sapiens telomerase reverse tran... 31 2.6
AF121948-1|AAD24464.1| 524|Homo sapiens telomerase reverse tran... 31 2.6
AF114847-1|AAD17210.1| 524|Homo sapiens telomerase reverse tran... 31 2.6
AF018167-1|AAC51724.1| 1132|Homo sapiens telomerase catalytic su... 31 2.6
AF015950-1|AAC51672.1| 1132|Homo sapiens telomerase reverse tran... 31 2.6
AB086950-1|BAC11015.1| 795|Homo sapiens ABG-deleted variant of ... 31 2.6
AB086379-1|BAC11014.1| 807|Homo sapiens beta and gamma deletion... 31 2.6
AB085628-1|BAC11010.1| 1069|Homo sapiens telomerase reverse tran... 31 2.6
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 31 2.6
>DQ264729-1|ABB72674.1| 1132|Homo sapiens telomerase reverse
transcriptase protein.
Length = 1132
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AY007685-1|AAG23289.1| 1132|Homo sapiens telomerase catalytic
subunit protein.
Length = 1132
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AF128894-1|AAD30037.1| 1132|Homo sapiens telomerase reverse
transcriptase protein.
Length = 1132
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AF121948-1|AAD24464.1| 524|Homo sapiens telomerase reverse
transcriptase protein.
Length = 524
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AF114847-1|AAD17210.1| 524|Homo sapiens telomerase reverse
transcriptase protein.
Length = 524
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AF018167-1|AAC51724.1| 1132|Homo sapiens telomerase catalytic
subunit protein.
Length = 1132
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AF015950-1|AAC51672.1| 1132|Homo sapiens telomerase reverse
transcriptase protein.
Length = 1132
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AB086950-1|BAC11015.1| 795|Homo sapiens ABG-deleted variant of
telomerase reverse transcriptase protein.
Length = 795
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AB086379-1|BAC11014.1| 807|Homo sapiens beta and gamma deletion
isoform of telomerase reverse transcriptase protein.
Length = 807
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AB085628-1|BAC11010.1| 1069|Homo sapiens telomerase reverse
transcriptase protein.
Length = 1069
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 31.5 bits (68), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 296 PHISRTQ*FIYSTGTKSTLKPSFCKRSLSP 207
P + T+ F+YS+G K L+PSF SL P
Sbjct: 323 PVYAETKHFLYSSGDKEQLRPSFLLSSLRP 352
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,772,402
Number of Sequences: 237096
Number of extensions: 1788566
Number of successful extensions: 3179
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3179
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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