Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19j01
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 33 0.19
Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.3
U42847-3|AAA83605.2| 210|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF016442-7|AAB65920.1| 481|Caenorhabditis elegans Hypothetical ... 29 4.1
AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein. 29 4.1
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 28 5.4
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 27 9.4
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 27 9.4
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 27 9.4
AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical ... 27 9.4
AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain pro... 27 9.4
AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein. 27 9.4
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 27 9.4
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 27 9.4
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +1
Query: 598 EELTRATQKIQAAYKGYHVRRNLLHHLK 681
E L A KIQAAYKGY VR+ + LK
Sbjct: 549 ERLGEAATKIQAAYKGYTVRKKHVQFLK 576
>Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical
protein C37E2.3 protein.
Length = 295
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
Frame = +3
Query: 129 YHERGAPDSTSE------YMRFYSKIFIGIADYQRTW-YP 227
YH+R AP +++ Y+ FY I +G+ Y R W YP
Sbjct: 210 YHKRDAPSNSTSWMISVVYVTFYFIIVLGVKYYNRMWVYP 249
>U42847-3|AAA83605.2| 210|Caenorhabditis elegans Hypothetical
protein F39H12.3 protein.
Length = 210
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 97 LPEGLKELMSDITREVLRTQPPNICDF 177
+P L+ ++ + REVLR+QP ++ +F
Sbjct: 9 VPHDLRPILEALAREVLRSQPSDVAEF 35
>Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical
protein C26H9A.1 protein.
Length = 966
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 648 ISFICCLYFLSCSR*LLKRWLRFTVQFYRVLGRELPG 538
+ F+ C++ C + ++K W+ F+V V G E PG
Sbjct: 648 VIFLSCIFIYLCIQIIVK-WIFFSVNAENVFGFEYPG 683
>AF016442-7|AAB65920.1| 481|Caenorhabditis elegans Hypothetical
protein K12B6.7 protein.
Length = 481
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 418 RMPLDEEMTAKVCQVARNAYRDYWYKKTLMEKELKPHPE 534
R PLD EM K ++AR + KKTL K + PE
Sbjct: 48 RAPLDTEMAGKNFEIARGIFTQRVEKKTL-AKNFRKGPE 85
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 418 RMPLDEEMTAKVCQVARNAYRDYWYKKTLMEKELKPHPE 534
R PLD EM K ++AR + KKTL K + PE
Sbjct: 211 RAPLDTEMAGKNFEIARGIFTQRVEKKTL-AKNFRKGPE 248
>AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein.
Length = 966
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 648 ISFICCLYFLSCSR*LLKRWLRFTVQFYRVLGRELPG 538
+ F+ C++ C + ++K W+ F+V V G E PG
Sbjct: 648 VIFLSCIFIYLCIQIIVK-WIFFSVNAENVFGFEYPG 683
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 198 IADYQRTWYPSSKDTRRLMRL*ALSIGASPP 290
++ Y R WYPS+ + ++ L A+ +G PP
Sbjct: 306 VSAYVR-WYPSNSNAEHVVSLNAVKVGVCPP 335
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = -2
Query: 236 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 72
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 217 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 276
Query: 71 FWRSSFI---LPIYIFLRFMAFIL 9
F F+ LPI++ L F++ ++
Sbjct: 277 FPTDCFLVEELPIFLLLGFISGLM 300
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = -2
Query: 236 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 72
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 71 FWRSSFI---LPIYIFLRFMAFIL 9
F F+ LPI++ L F++ ++
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLM 331
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = -2
Query: 236 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 72
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 71 FWRSSFI---LPIYIFLRFMAFIL 9
F F+ LPI++ L F++ ++
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLM 331
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = -2
Query: 236 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 72
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 217 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 276
Query: 71 FWRSSFI---LPIYIFLRFMAFIL 9
F F+ LPI++ L F++ ++
Sbjct: 277 FPTDCFLVEELPIFLLLGFISGLM 300
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = -2
Query: 236 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 72
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 71 FWRSSFI---LPIYIFLRFMAFIL 9
F F+ LPI++ L F++ ++
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLM 331
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = -2
Query: 236 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 72
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 71 FWRSSFI---LPIYIFLRFMAFIL 9
F F+ LPI++ L F++ ++
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLM 331
>AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical
protein Y106G6E.5 protein.
Length = 731
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 433 EEMTAKVCQVARNAYRDYWYKKTLMEKELKPHPEEPWELAAQHTIELYSKTKPSFEELTR 612
EE++A + + A ++ W ++ L ++ ++ H E I+L SK +P EEL R
Sbjct: 494 EELSADLETFSYRAMQEIWREEQLGKENIQLHSEA--------VIQLKSKLRPKMEELVR 545
>AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain
protein CED-12 protein.
Length = 731
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 433 EEMTAKVCQVARNAYRDYWYKKTLMEKELKPHPEEPWELAAQHTIELYSKTKPSFEELTR 612
EE++A + + A ++ W ++ L ++ ++ H E I+L SK +P EEL R
Sbjct: 494 EELSADLETFSYRAMQEIWREEQLGKENIQLHSEA--------VIQLKSKLRPKMEELVR 545
>AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein.
Length = 731
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 433 EEMTAKVCQVARNAYRDYWYKKTLMEKELKPHPEEPWELAAQHTIELYSKTKPSFEELTR 612
EE++A + + A ++ W ++ L ++ ++ H E I+L SK +P EEL R
Sbjct: 494 EELSADLETFSYRAMQEIWREEQLGKENIQLHSEA--------VIQLKSKLRPKMEELVR 545
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = -2
Query: 236 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 72
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 71 FWRSSFI---LPIYIFLRFMAFIL 9
F F+ LPI++ L F++ ++
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLM 331
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = -2
Query: 236 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 72
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 217 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 276
Query: 71 FWRSSFI---LPIYIFLRFMAFIL 9
F F+ LPI++ L F++ ++
Sbjct: 277 FPTDCFLVEELPIFLLLGFISGLM 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,115,743
Number of Sequences: 27780
Number of extensions: 304359
Number of successful extensions: 893
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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