Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19i24
(676 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0170 + 21482962-21483018,21483133-21483183,21483313-214835... 76 2e-14
02_01_0523 - 3792864-3792962,3793509-3793610,3793861-3793974,379... 69 3e-12
02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881 41 0.001
12_01_0537 - 4215833-4216005,4216168-4216366,4216399-4216497,421... 39 0.003
12_01_0536 - 4212206-4212369,4212476-4212629,4212713-4212811,421... 37 0.017
07_03_0878 - 22251023-22251166,22251279-22251329,22251425-222515... 34 0.090
05_05_0017 + 21546434-21546841 32 0.48
05_03_0458 + 14280953-14281866,14281964-14282912 30 1.5
03_03_0105 + 14491198-14493636,14494793-14494957,14495647-144957... 29 2.6
06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554 29 3.4
01_01_0871 + 6813091-6814212 29 3.4
12_02_0913 + 24246217-24247557 29 4.5
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 29 4.5
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 4.5
11_01_0066 - 536281-537196,537397-537452 28 5.9
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 28 7.8
>03_05_0170 +
21482962-21483018,21483133-21483183,21483313-21483500,
21483587-21483671,21483848-21483902,21483998-21484041,
21485045-21485113,21485207-21485307,21485396-21485452,
21485540-21485636
Length = 267
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +1
Query: 1 TSRDPERFKAVMENYKILVSKGHGVRTLGSAALNMAMVALGGADAYFEFGIHA-WDVAAG 177
T RD L+ K +R GS ALNM VA G D +E G WDVAAG
Sbjct: 163 TKRDKATLDDTTNRINKLLFKIRSIRMCGSLALNMCGVACGRLDLCYEIGFGGPWDVAAG 222
Query: 178 TVLVREAGGVVIDPAGGPFDILSRRILSASTMELAEEISKNI 303
+++REAGG V DP+GG FD+++RR ++ S L ++ K +
Sbjct: 223 ALILREAGGFVFDPSGGEFDLMARR-MAGSNSYLKDQFIKEL 263
>02_01_0523 -
3792864-3792962,3793509-3793610,3793861-3793974,
3794060-3794158,3794725-3794779,3795266-3795433,
3795668-3795735,3796133-3796195,3796425-3796703
Length = 348
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = +1
Query: 43 YKILVSKGHGVRTLGSAALNMAMVALGGADAYFEFGIHAWDVAAGTVLVREAGGVVIDPA 222
+K GVR LGSAA +M+ VALG +AY+E+ + WD+AAG ++V EAGG+V
Sbjct: 236 FKEYTDISRGVRRLGSAAADMSHVALGITEAYWEYRLKPWDMAAGVLIVEEAGGMVSRMD 295
Query: 223 GGPFDILSRRIL 258
GG F + R +L
Sbjct: 296 GGEFTVFDRSVL 307
>02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881
Length = 463
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +1
Query: 160 WDVAAGTVLVREAGGVVIDPAGGPFD 237
WD AAG V++REAGGV+ D G P D
Sbjct: 399 WDHAAGVVIIREAGGVITDAGGRPLD 424
>12_01_0537 -
4215833-4216005,4216168-4216366,4216399-4216497,
4216599-4216809,4217264-4217466,4217557-4217633,
4217874-4217949,4218342-4218425
Length = 373
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 160 WDVAAGTVLVREAGGVVIDPAGGPFDILSRRILSAST 270
WD AAG+++V EAGG+V D +G D R L T
Sbjct: 306 WDHAAGSIVVTEAGGLVTDASGNDLDFSKGRFLDLDT 342
>12_01_0536 -
4212206-4212369,4212476-4212629,4212713-4212811,
4212917-4213124,4214437-4214639,4214728-4214801,
4214968-4215043,4215256-4215360
Length = 360
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 160 WDVAAGTVLVREAGGVVIDPAGGPFDILSRRIL 258
WD AAG+++V EAGG+V D +G D R L
Sbjct: 296 WDHAAGSIIVTEAGGLVKDASGNDLDFSKGRYL 328
>07_03_0878 -
22251023-22251166,22251279-22251329,22251425-22251500,
22251847-22252229,22252983-22253042,22253133-22253368,
22253457-22253559,22254692-22254824,22254930-22255039
Length = 431
Score = 34.3 bits (75), Expect = 0.090
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 151 IHAWDVAAGTVLVREAGGVVIDPAGGPFDI 240
+ +WD A G + V+EAGG + D +G P D+
Sbjct: 366 LKSWDHAVGVICVQEAGGQISDWSGKPLDL 395
>05_05_0017 + 21546434-21546841
Length = 135
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 224 PAGSMTTP-PASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEPNVLT 72
PAG+ TTP PA+ T PA + +A +S A+APP T A V T
Sbjct: 80 PAGATTTPAPAAPAATAPAPSPEADGKSSGAAAAPPLMTWPAVLAGAAGVAT 131
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 242 NMSNGPPAGSMTTPPASLTKTVPAATSQA*IPNSK*ASAPP 120
N + PP+ S +TP +S T TVP + + P+S +S PP
Sbjct: 28 NAAPSPPS-SNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPP 67
>03_03_0105 +
14491198-14493636,14494793-14494957,14495647-14495760,
14496223-14496487,14497164-14497237,14497851-14497928
Length = 1044
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 229 PFDILSRRILSASTMELAEEISKNIVQFYPE 321
P +I SRR+ MEL EE ++N+ + PE
Sbjct: 509 PKEIRSRRLFELLEMELLEEYNRNVSKLSPE 539
>06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554
Length = 449
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 224 PAGSMTTPPASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEP 84
PA + T PA+ + PAA S A P + +AP A+ A+ A P
Sbjct: 358 PAAASTAAPAAASTAAPAAASTA-APAAASTAAPAAASTAVPDDATP 403
>01_01_0871 + 6813091-6814212
Length = 373
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = -3
Query: 227 PPAGSMTTPPASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEPNVLTPCPLLTR 51
PP S PA+ + + + A P S S PP A +A A P PL+ R
Sbjct: 220 PPGASKNASPATSYDSGEESHAAAASPTSVLRSFPPSAVVATADTANKKQPPPPPLVVR 278
>12_02_0913 + 24246217-24247557
Length = 446
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 196 AGGVVIDPAGGPFDILSRRILSASTMELAEEISKNIVQFYPERD 327
+GGV+ID +G PF L A ELA ++ ++V P+ D
Sbjct: 315 SGGVIID-SGSPFTSLVHDAYDALASELAARLNGSLVAPPPDAD 357
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 284 SANSIVLALSILLDNMSNGPPAGSMTTPPASLT 186
+A S V L + ++MS G P G + T PA+LT
Sbjct: 224 AACSAVTTLDVSWNHMSGGLPPGLVATAPANLT 256
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 248 LDNMSNGPPAGSMTTPP-ASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEPNVLT 72
+ + S+ PPA TPP A+ T P A++ + P + + +PP T +A P T
Sbjct: 1 MSSPSSPPPANQTATPPPANQTAAPPPASNNSSSPPAPGSLSPPSLTPP--AAPSPPSTT 58
Query: 71 P 69
P
Sbjct: 59 P 59
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -3
Query: 227 PPAGSMTTPPASLTKTVP-AATSQA*IPNSK*ASAP--PKATIAIFSAAEPNVLTPCPLL 57
PP + T PP S T T A+ + IP + P P+AT+ P+ T P+
Sbjct: 231 PPPSTATPPPPSPTPTTTRASPTPPPIPTATVRPPPPLPRATVTPTPTTPPSTATTTPIP 290
Query: 56 T 54
T
Sbjct: 291 T 291
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -3
Query: 311 N*TIFFEISSANSIVLALSILLDNMSNGPPAGSMTTPPASLTKTVPAAT 165
N FF++ S ++ VL +L + G P G +TP + + +P+A+
Sbjct: 2689 NEMFFFKVESEDNYVLEFVVL--DAGGGQPVGIYSTPLKQVVQKLPSAS 2735
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,180,932
Number of Sequences: 37544
Number of extensions: 344423
Number of successful extensions: 827
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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