BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19i21
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB018318-1|BAA34495.2| 639|Homo sapiens KIAA0775 protein protein. 33 0.72
BC036113-1|AAH36113.2| 619|Homo sapiens DIS3 mitotic control ho... 33 1.3
BC026166-1|AAH26166.1| 619|Homo sapiens DIS3 mitotic control ho... 33 1.3
AC068134-1|AAY24086.1| 66|Homo sapiens unknown protein. 33 1.3
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 31 5.0
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 31 5.0
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 31 5.0
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 31 5.0
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 31 5.0
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 31 5.0
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 31 5.0
AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open read... 31 5.0
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 31 5.0
BC133039-1|AAI33040.1| 1001|Homo sapiens TAO kinase 1 protein. 30 6.7
BC022231-1|AAH22231.1| 548|Homo sapiens Ets2 repressor factor p... 30 6.7
AY515705-1|AAR99655.1| 509|Homo sapiens bestrophin 2 protein. 30 6.7
AY049015-1|AAL12217.1| 1001|Homo sapiens serine/threonine kinase... 30 6.7
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 30 6.7
AK000139-1|BAA90970.1| 466|Homo sapiens protein ( Homo sapiens ... 30 6.7
AF440756-1|AAM76995.1| 509|Homo sapiens vitelliform macular dys... 30 6.7
AF263312-1|AAG38502.1| 1001|Homo sapiens STE20-like kinase protein. 30 6.7
AC006486-2|AAD11987.1| 548|Homo sapiens ERF_HUMAN protein. 30 6.7
AB209271-1|BAD92508.1| 561|Homo sapiens ETS domain transcriptio... 30 6.7
AB037782-1|BAA92599.1| 1005|Homo sapiens KIAA1361 protein protein. 30 6.7
CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein. 30 8.8
BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase pr... 30 8.8
BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase pr... 30 8.8
AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein pr... 30 8.8
AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA seq... 30 8.8
AK055269-1|BAB70894.1| 546|Homo sapiens protein ( Homo sapiens ... 30 8.8
AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting wi... 30 8.8
AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein. 30 8.8
>AB018318-1|BAA34495.2| 639|Homo sapiens KIAA0775 protein protein.
Length = 639
Score = 33.5 bits (73), Expect = 0.72
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 262 PQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRSPLKNLLAPTAIRSASNVS 441
P + PA C P+ P PPC P + RSP+ +P RS ++ S
Sbjct: 360 PLSQRHSPAPQCPSPSPPAR----AAPPCP-PCQSPVPQRRSPVPPCPSPQQRRSPASPS 414
Query: 442 CPLPL-QCRNPL 474
CP P+ Q R+P+
Sbjct: 415 CPSPVPQRRSPV 426
>BC036113-1|AAH36113.2| 619|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae)-like 2 protein.
Length = 619
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 297 PASSGSPRTSIGCRPTLWEAYPRYVFQYAVATQEPS 404
P +G+PR GC T W + R+ + A QEPS
Sbjct: 581 PCCAGTPRPKQGCSVTWWNSATRWGCPWTSAPQEPS 616
>BC026166-1|AAH26166.1| 619|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae)-like 2 protein.
Length = 619
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 297 PASSGSPRTSIGCRPTLWEAYPRYVFQYAVATQEPS 404
P +G+PR GC T W + R+ + A QEPS
Sbjct: 581 PCCAGTPRPKQGCSVTWWNSATRWGCPWTSAPQEPS 616
>AC068134-1|AAY24086.1| 66|Homo sapiens unknown protein.
Length = 66
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 297 PASSGSPRTSIGCRPTLWEAYPRYVFQYAVATQEPS 404
P +G+PR GC T W + R+ + A QEPS
Sbjct: 28 PCCAGTPRPKQGCSVTWWNSATRWGCPWTSAPQEPS 63
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +3
Query: 258 PTPSLATETGPVLPASSGSPRTSIGCRPTLWEAYPRYVFQYAVATQEPSGPNGHPFREQC 437
P P T P+L SG+P T P + + P A P P GHP +
Sbjct: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPG 65
Query: 438 VLPTATSVSQSF 473
+P S ++
Sbjct: 66 FIPPHMSADGTY 77
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +3
Query: 258 PTPSLATETGPVLPASSGSPRTSIGCRPTLWEAYPRYVFQYAVATQEPSGPNGHPFREQC 437
P P T P+L SG+P T P + + P A P P GHP +
Sbjct: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPG 65
Query: 438 VLPTATSVSQSF 473
+P S ++
Sbjct: 66 FIPPHMSADGTY 77
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +3
Query: 258 PTPSLATETGPVLPASSGSPRTSIGCRPTLWEAYPRYVFQYAVATQEPSGPNGHPFREQC 437
P P T P+L SG+P T P + + P A P P GHP +
Sbjct: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPG 65
Query: 438 VLPTATSVSQSF 473
+P S ++
Sbjct: 66 FIPPHMSADGTY 77
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 241 PLLDIGLPQASPQRPA-LCCLHPADPREPQ*VVGPPCGRPTHATSSSTRSPLKNLLAPTA 417
P + L P P L PA P P VGP P H + + S +LLAP +
Sbjct: 1728 PAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA---PAHTLTLAPASSSASLLAPAS 1784
Query: 418 IRSASNVSCPLP 453
+++ + P+P
Sbjct: 1785 VQTLTLSPAPVP 1796
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 241 PLLDIGLPQASPQRPA-LCCLHPADPREPQ*VVGPPCGRPTHATSSSTRSPLKNLLAPTA 417
P + L P P L PA P P VGP P H + + S +LLAP +
Sbjct: 377 PAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA---PAHTLTLAPASSSASLLAPAS 433
Query: 418 IRSASNVSCPLP 453
+++ + P+P
Sbjct: 434 VQTLTLSPAPVP 445
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +3
Query: 258 PTPSLATETGPVLPASSGSPRTSIGCRPTLWEAYPRYVFQYAVATQEPSGPNGHPFREQC 437
P P T P+L SG+P T P + + P A P P GHP +
Sbjct: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPG 65
Query: 438 VLPTATSVSQSF 473
+P S ++
Sbjct: 66 FIPPHMSADGTY 77
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 241 PLLDIGLPQASPQRPA-LCCLHPADPREPQ*VVGPPCGRPTHATSSSTRSPLKNLLAPTA 417
P + L P P L PA P P VGP P H + + S +LLAP +
Sbjct: 1469 PAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA---PAHTLTLAPASSSASLLAPAS 1525
Query: 418 IRSASNVSCPLP 453
+++ + P+P
Sbjct: 1526 VQTLTLSPAPVP 1537
>AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 261
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +3
Query: 258 PTPSLATETGPVLPASSGSPRTSIGCRPTLWEAYPRYVFQYAVATQEPSGPNGHPFREQC 437
P P T P+L SG+P T P + + P A P P GHP +
Sbjct: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPG 65
Query: 438 VLPTATSVSQSF 473
+P S ++
Sbjct: 66 FIPPHMSADGTY 77
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 241 PLLDIGLPQASPQRPA-LCCLHPADPREPQ*VVGPPCGRPTHATSSSTRSPLKNLLAPTA 417
P + L P P L PA P P VGP P H + + S +LLAP +
Sbjct: 1551 PAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA---PAHTLTLAPASSSASLLAPAS 1607
Query: 418 IRSASNVSCPLP 453
+++ + P+P
Sbjct: 1608 VQTLTLSPAPVP 1619
>BC133039-1|AAI33040.1| 1001|Homo sapiens TAO kinase 1 protein.
Length = 1001
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 362 WVGLPQGGPTTY*GSRGSAGCRQHRAGLCGEAWGRPMSSSGRPWAH 225
W P GGP + G H G +AWG PM +PW H
Sbjct: 910 WSHNPTGGPGPHWG---------HPMGGPPQAWGHPMQGGPQPWGH 946
>BC022231-1|AAH22231.1| 548|Homo sapiens Ets2 repressor factor
protein.
Length = 548
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 256 GLPQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRSPLKNLLAP 411
GL PQRP C L P P P P ++SSS+ SP K L P
Sbjct: 336 GLVVPQPQRPDKCPLPPMAPETP------PVPSSASSSSSSSSSPFKFKLQP 381
>AY515705-1|AAR99655.1| 509|Homo sapiens bestrophin 2 protein.
Length = 509
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 190 SCTIIMEVHWRTCAHGRPLLDIGLPQASPQRPA 288
SC ++ E C+ G PLLD GLP+ PA
Sbjct: 434 SCAVVPEGAAPECSCGDPLLDPGLPEPEAPPPA 466
>AY049015-1|AAL12217.1| 1001|Homo sapiens serine/threonine kinase TAO1
protein.
Length = 1001
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 362 WVGLPQGGPTTY*GSRGSAGCRQHRAGLCGEAWGRPMSSSGRPWAH 225
W P GGP + G H G +AWG PM +PW H
Sbjct: 910 WSHNPTGGPGPHWG---------HPMGGPPQAWGHPMQGGPQPWGH 946
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 30.3 bits (65), Expect = 6.7
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +1
Query: 259 LPQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRSP 390
LP P ALC P DPR P PP P A +S SP
Sbjct: 187 LPLPPPAPAALC---PRDPRAPAACSAPPGAAPPAAAASPPASP 227
>AK000139-1|BAA90970.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ20132 fis, clone COL06441. ).
Length = 466
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 190 SCTIIMEVHWRTCAHGRPLLDIGLPQASPQRPA 288
SC ++ E C+ G PLLD GLP+ PA
Sbjct: 391 SCAVVPEGAAPECSCGDPLLDPGLPEPEAPPPA 423
>AF440756-1|AAM76995.1| 509|Homo sapiens vitelliform macular
dystrophy 2-like protein 1 protein.
Length = 509
Score = 30.3 bits (65), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 190 SCTIIMEVHWRTCAHGRPLLDIGLPQASPQRPA 288
SC ++ E C+ G PLLD GLP+ PA
Sbjct: 434 SCAVVPEGAAPECSCGDPLLDPGLPEPEAPPPA 466
>AF263312-1|AAG38502.1| 1001|Homo sapiens STE20-like kinase protein.
Length = 1001
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 362 WVGLPQGGPTTY*GSRGSAGCRQHRAGLCGEAWGRPMSSSGRPWAH 225
W P GGP + G H G +AWG PM +PW H
Sbjct: 910 WSHNPTGGPGPHWG---------HPMGGPPQAWGHPMQGGPQPWGH 946
>AC006486-2|AAD11987.1| 548|Homo sapiens ERF_HUMAN protein.
Length = 548
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 256 GLPQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRSPLKNLLAP 411
GL PQRP C L P P P P ++SSS+ SP K L P
Sbjct: 336 GLVVPQPQRPDKCPLPPMAPETP------PVPSSASSSSSSSSSPFKFKLQP 381
>AB209271-1|BAD92508.1| 561|Homo sapiens ETS domain transcription
factor ERF variant protein.
Length = 561
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 256 GLPQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRSPLKNLLAP 411
GL PQRP C L P P P P ++SSS+ SP K L P
Sbjct: 349 GLVVPQPQRPDKCPLPPMAPETP------PVPSSASSSSSSSSSPFKFKLQP 394
>AB037782-1|BAA92599.1| 1005|Homo sapiens KIAA1361 protein protein.
Length = 1005
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 362 WVGLPQGGPTTY*GSRGSAGCRQHRAGLCGEAWGRPMSSSGRPWAH 225
W P GGP + G H G +AWG PM +PW H
Sbjct: 914 WSHNPTGGPGPHWG---------HPMGGPPQAWGHPMQGGPQPWGH 950
>CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein.
Length = 863
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 262 PQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRS 387
P+ASP+ P P + Q + PP GRPT A ++ S
Sbjct: 270 PKASPEARPQIPTKPRVPGKLQELASPPAGRPTPAPRKASES 311
>BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 340 PPCGRPT---HATSSSTRSPLKNLLAPTAIRSASNVSCPLPLQCRNPLGYVGYHGFPANL 510
P C RP H +S RS ++N A+ +S P P PLG HG P L
Sbjct: 3 PLCPRPALCYHFLTSLLRSAMQNARGARQRAEAAVLSGPGP-----PLGRAAQHGIPRPL 57
Query: 511 LISDLISQG 537
+ +SQG
Sbjct: 58 SSAGRLSQG 66
>BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 340 PPCGRPT---HATSSSTRSPLKNLLAPTAIRSASNVSCPLPLQCRNPLGYVGYHGFPANL 510
P C RP H +S RS ++N A+ +S P P PLG HG P L
Sbjct: 3 PLCPRPALCYHFLTSLLRSAMQNARGARQRAEAAVLSGPGP-----PLGRAAQHGIPRPL 57
Query: 511 LISDLISQG 537
+ +SQG
Sbjct: 58 SSAGRLSQG 66
>AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein
protein.
Length = 657
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 262 PQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRS 387
P+ASP+ P P + Q + PP GRPT A ++ S
Sbjct: 64 PKASPEARPQIPTKPRVPGKLQELASPPAGRPTPAPRKASES 105
>AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA
sequence from clone RP5-1014D13 on chromosome
22q13.1-13.2. ).
Length = 863
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 262 PQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRS 387
P+ASP+ P P + Q + PP GRPT A ++ S
Sbjct: 270 PKASPEARPQIPTKPRVPGKLQELASPPAGRPTPAPRKASES 311
>AK055269-1|BAB70894.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ30707 fis, clone FCBBF2001211. ).
Length = 546
Score = 29.9 bits (64), Expect = 8.8
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +1
Query: 193 CTIIMEVHWRTCAHGRPLLDIGLPQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATS 372
C+ I E W+T H R + + + + P +H A ++ P P+H
Sbjct: 257 CSPISEGRWQTEDHDRNKILLQAQRVHKKFPKPGRVHHASEKKRHSTPLPSTAVPSHTPG 316
Query: 373 SSTRSPLKNLLAPTAIRS 426
SS +SPL N P IR+
Sbjct: 317 SSQQSPL-NSPHPGPIRT 333
>AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting with
Rab13 protein.
Length = 863
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 262 PQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRS 387
P+ASP+ P P + Q + PP GRPT A ++ S
Sbjct: 270 PKASPEARPQIPTKPRVPGKLQELASPPAGRPTPAPRKASES 311
>AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein.
Length = 791
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 262 PQASPQRPALCCLHPADPREPQ*VVGPPCGRPTHATSSSTRS 387
P+ASP+ P P + Q + PP GRPT A ++ S
Sbjct: 198 PKASPEARPQIPTKPRVPGKLQELASPPAGRPTPAPRKASES 239
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,403,658
Number of Sequences: 237096
Number of extensions: 3275801
Number of successful extensions: 9755
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 8974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9738
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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