Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19i20
(611 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.30
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 29 0.40
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 28 0.93
SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1 |Schizosa... 28 1.2
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 28 1.2
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 27 1.6
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.8
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 26 3.7
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 6.5
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 6.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.5
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 25 8.6
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 25 8.6
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.30
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 413 ISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNKMNYGVNINEYEKQLQRYQHTLNIAQT 592
+SN+ + S +QE+ L S S+ DN G I E EK++++ +LN QT
Sbjct: 1253 VSNDQTDTPIISGSQEVQLLYESNSVLRK--DNDAKLG-KIQELEKEVEKLNASLNPLQT 1309
Query: 593 E 595
E
Sbjct: 1310 E 1310
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 29.5 bits (63), Expect = 0.40
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +2
Query: 215 DNKMNAKDHNNECGNDVTPQLIDDSEVKLKERIAQCRDIIESXXXXXXXXXXXQNALKVS 394
D+ +N+K +N N PQ +DD + K+ I+ + ++S
Sbjct: 410 DSPLNSKIEDNLIDNLKYPQSLDD-HLSSKKPIS----YFSNKLTHQTLPNVFTQLSELS 464
Query: 395 PAHFESISNNSPTFSLTSN--NQELDDLELSKSIYSTCIDNKMNYGVNINE-YEKQLQRY 565
H S++ T++L Q + + E + +++ +N NY VN E Q +++
Sbjct: 465 KCHEASLAEKQLTYNLAMEALEQTVRETETCQRLWNERTNNDENYLVNQREDLIHQCKKF 524
Query: 566 QHTLNIAQ 589
HTL A+
Sbjct: 525 LHTLKTAR 532
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 28.3 bits (60), Expect = 0.93
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 548 SHTH*Y*LHSSFYCRCTYYRCFLIILDHPVLD 453
S+TH Y +H + CRC Y FL +L P L+
Sbjct: 312 SYTHRYPVHRAIMCRCEY---FLDMLAGPFLE 340
>SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2
Query: 466 IQFLIIRSQRKCGTVIGNGFKMSR 395
+ ++ R+QRK TVI +GFK+SR
Sbjct: 19 LDVVLSRTQRKTPTVIRSGFKISR 42
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 173 IDNNEQPKLDEKYHDNKMNAKDHNNECGNDVTPQL 277
+DNN + + + +D ++++ D N NDVT QL
Sbjct: 291 VDNNGRVWMTSQEYDTEVSSTDERNFRANDVTLQL 325
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 389 VSPAHFESISNNSPTFSLTSNNQELDDLELSKS 487
V P HFE + S TF ++N L +SKS
Sbjct: 5 VDPVHFERLKIQSVTFGSANDNASLQVHNVSKS 37
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/75 (17%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 374 QNALKVSPAHFESISNNSPTFSLTSNNQ----ELDDLELSKSIYSTCIDNKMNYGVNINE 541
+ +S +HF S+ N S SNN+ D+ L+ +S ++ + N+
Sbjct: 149 EGVTSLSDSHFNSLEANLKAISKDSNNKAHNNRYDESSLTNPEFSILVERLKSIEENLQS 208
Query: 542 YEKQLQRYQHTLNIA 586
++++ + +++++
Sbjct: 209 LQERISHCERSVSLS 223
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 389 VSPAHFESISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNK 514
VS H E NN+ FSLT++ Q ++ S + +D++
Sbjct: 127 VSQIHTEQNFNNNDAFSLTNSQQAFSEIGYDASNWIDELDSQ 168
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 383 LKVSPAHFESISNNSPTFSLTSNNQEL 463
L+ SP H + +S++ T SL +NN L
Sbjct: 519 LRGSPIHNQPVSSSKSTASLNTNNNGL 545
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +2
Query: 395 PAHFESISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNKMNYGVNINEYEKQLQRYQHT 574
P + S + T S N + + LS + +DN + N+ E+Q +R+Q T
Sbjct: 160 PVEESNTSLDMSTISSELQNIRIQQMNLSNELSRIQVDNAALWQENMENRERQ-RRHQET 218
Query: 575 LN 580
++
Sbjct: 219 ID 220
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 389 VSPAHFESISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNKMNYGVNINEY 544
VS +IS+N P+ + +S +Q + L+ S+Y + ++ + NEY
Sbjct: 761 VSSTTVSNISSNLPSATASSQSQLTNSSTLATSLYLSSSSSRTISTSSTNEY 812
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 179 NNEQPKLDEKYHDNKMNAKDHNNECGNDVTPQLID-DSEVKLKER 310
NNE+P +++ D N++ N+ T +L D D E LK R
Sbjct: 356 NNEEPNSVVAEDGSEIITLDENDQSPNEATEKLRDNDLEESLKMR 400
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 191 PKLDEKYHDNKMNAKDHNNECGNDVTPQLIDDSEVKLKE 307
P + ++++D K NA+ E ++I+D ++KE
Sbjct: 141 PTIKQQFNDRKKNAQIREREALAKREQEMIEDRRQRIKE 179
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,187,801
Number of Sequences: 5004
Number of extensions: 39346
Number of successful extensions: 139
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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