Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19i19
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031695-1|AAH31695.1| 203|Homo sapiens deleted in a mouse mode... 79 1e-14
BC001082-1|AAH01082.2| 203|Homo sapiens deleted in a mouse mode... 79 1e-14
AY532267-1|AAS46252.1| 200|Homo sapiens DPCD protein. 79 1e-14
AL627424-15|CAI41040.1| 203|Homo sapiens novel protein protein. 79 1e-14
AL627424-14|CAI41039.1| 170|Homo sapiens novel protein protein. 79 1e-14
AL627424-16|CAI41041.1| 116|Homo sapiens novel protein protein. 48 4e-05
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein. 31 2.7
AY590151-1|AAT01278.1| 534|Homo sapiens prostate cancer antigen... 31 2.7
AK025632-1|BAB15196.1| 720|Homo sapiens protein ( Homo sapiens ... 31 2.7
>BC031695-1|AAH31695.1| 203|Homo sapiens deleted in a mouse model
of primary ciliary dyskinesia protein.
Length = 203
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +2
Query: 434 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 613
T W +L A+K+ L ++ +K+HY F DG+EM EEY+ T LL R W+VK LG G+
Sbjct: 4 TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63
Query: 614 WHVEIGDPIP 643
W +E+GDP P
Sbjct: 64 WQLEVGDPAP 73
>BC001082-1|AAH01082.2| 203|Homo sapiens deleted in a mouse model
of primary ciliary dyskinesia protein.
Length = 203
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +2
Query: 434 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 613
T W +L A+K+ L ++ +K+HY F DG+EM EEY+ T LL R W+VK LG G+
Sbjct: 4 TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63
Query: 614 WHVEIGDPIP 643
W +E+GDP P
Sbjct: 64 WQLEVGDPAP 73
>AY532267-1|AAS46252.1| 200|Homo sapiens DPCD protein.
Length = 200
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +2
Query: 434 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 613
T W +L A+K+ L ++ +K+HY F DG+EM EEY+ T LL R W+VK LG G+
Sbjct: 1 TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 60
Query: 614 WHVEIGDPIP 643
W +E+GDP P
Sbjct: 61 WQLEVGDPAP 70
>AL627424-15|CAI41040.1| 203|Homo sapiens novel protein protein.
Length = 203
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +2
Query: 434 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 613
T W +L A+K+ L ++ +K+HY F DG+EM EEY+ T LL R W+VK LG G+
Sbjct: 4 TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63
Query: 614 WHVEIGDPIP 643
W +E+GDP P
Sbjct: 64 WQLEVGDPAP 73
>AL627424-14|CAI41039.1| 170|Homo sapiens novel protein protein.
Length = 170
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +2
Query: 434 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 613
T W +L A+K+ L ++ +K+HY F DG+EM EEY+ T LL R W+VK LG G+
Sbjct: 4 TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63
Query: 614 WHVEIGDPIP 643
W +E+GDP P
Sbjct: 64 WQLEVGDPAP 73
>AL627424-16|CAI41041.1| 116|Homo sapiens novel protein protein.
Length = 116
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 536 EEYNVDTQVLLRRAWKVKGKLGGEGKWHVEIGDPIP 643
EEY+ T LL R W+VK LG G+W +E+GDP P
Sbjct: 2 EEYDEKTSELLVRKWRVKSALGAMGQWQLEVGDPAP 37
>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
Length = 2479
Score = 31.5 bits (68), Expect = 2.7
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 323 LETMKRKTCLIETFESCENYDKKHRNIQSGTATMYKNTIWYHTLLDAEKSCLKEEKVKKI 502
LE ++K +E +S E+Y++K I+ + +YK + E +KEEK +K+
Sbjct: 791 LENKEKKLKNLE--DSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEK-RKL 847
Query: 503 HYKFEDGREMVEEYN 547
+ + V+EYN
Sbjct: 848 EDQVQQDAIKVKEYN 862
>AY590151-1|AAT01278.1| 534|Homo sapiens prostate cancer antigen
T21 protein.
Length = 534
Score = 31.5 bits (68), Expect = 2.7
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 323 LETMKRKTCLIETFESCENYDKKHRNIQSGTATMYKNTIWYHTLLDAEKSCLKEEKVKKI 502
LE ++K +E +S E+Y++K I+ + +YK + E +KEEK +K+
Sbjct: 221 LENKEKKLKNLE--DSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEK-RKL 277
Query: 503 HYKFEDGREMVEEYN 547
+ + V+EYN
Sbjct: 278 EDQVQQDAIKVKEYN 292
>AK025632-1|BAB15196.1| 720|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21979 fis, clone HEP06065. ).
Length = 720
Score = 31.5 bits (68), Expect = 2.7
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 323 LETMKRKTCLIETFESCENYDKKHRNIQSGTATMYKNTIWYHTLLDAEKSCLKEEKVKKI 502
LE ++K +E +S E+Y++K I+ + +YK + E +KEEK +K+
Sbjct: 426 LENKEKKLKNLE--DSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEK-RKL 482
Query: 503 HYKFEDGREMVEEYN 547
+ + V+EYN
Sbjct: 483 EDQVQQDAIKVKEYN 497
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,679,159
Number of Sequences: 237096
Number of extensions: 1489237
Number of successful extensions: 6382
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6382
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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