Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19i15
         (292 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    24   0.44 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   5.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   5.4  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           20   7.1  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           20   7.1  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    19   9.4  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      19   9.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   9.4  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 0.44
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 264 NNNLNSFSKETDCLYENVHGRNILNI 187
           NNN N+++   +  Y+ +   NI+NI
Sbjct: 95  NNNYNNYNNNYNTNYKKLQYYNIINI 120


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 267 INNNLNSFSKETDCLYENVHGRNILNISLEHFI 169
           +N+N+ +FS+ET+   +N     ILN S E  I
Sbjct: 485 LNDNVFAFSRETE---DNGSLYAILNFSNEEQI 514


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 267 INNNLNSFSKETDCLYENVHGRNILNISLEHFI 169
           +N+N+ +FS+ET+   +N     ILN S E  I
Sbjct: 485 LNDNVFAFSRETE---DNGSLYAILNFSNEEQI 514


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 208 WQKYLEHIFGTLHRTHAT 155
           W K L+ +FG +++  A+
Sbjct: 154 WNKTLDMMFGKIYQVFAS 171


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 208 WQKYLEHIFGTLHRTHAT 155
           W K L+ +FG +++  A+
Sbjct: 154 WNKTLDMMFGKIYQVFAS 171


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 11/33 (33%), Positives = 11/33 (33%)
 Frame = -2

Query: 270 FINNNLNSFSKETDCLYENVHGRNILNISLEHF 172
           FIN N     KE    YE         I  E F
Sbjct: 209 FINENSELLFKELQAAYEETFSLVFTKIDNEIF 241


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 162 MLPNTEPISS*TQRFQTVRL 103
           ++  T+P+S  TQR Q + L
Sbjct: 3   IMQTTQPVSLQTQRIQGLYL 22


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 173 KCSKDMFKIFLPC 211
           +CS+D F+I   C
Sbjct: 20  RCSRDWFRISAGC 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,358
Number of Sequences: 438
Number of extensions: 1637
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)