Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19i14
         (601 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0397 - 17230152-17231453                                         30   1.6  
01_05_0399 - 21784997-21785284,21785450-21785603,21786444-217866...    29   2.2  

>11_04_0397 - 17230152-17231453
          Length = 433

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +3

Query: 351 KGVGNQEFGATVFLPADSGAILFYLTIYACNGNTSEKDIPAKCSEK*LKKR 503
           +GVG   FGAT  L    GA+   L+  A    T+ K +P +  E+ L  R
Sbjct: 62  RGVGTAAFGATAVLCLAVGAVSLLLSWSAAARMTATKALPTRRVERRLLNR 112


>01_05_0399 -
           21784997-21785284,21785450-21785603,21786444-21786687,
           21786790-21787036
          Length = 310

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 222 VWGHTRYNRVLDIYFKSEDPSVLVSKAEIILLINNTN 332
           +W + RYN +LD Y + E    L  + +I LL    N
Sbjct: 219 IWSNRRYNELLDPYLRVEFQEELTRQIQIALLCVQKN 255


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,044,887
Number of Sequences: 37544
Number of extensions: 266509
Number of successful extensions: 565
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)