Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19i13
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0860 - 32296743-32296769,32297328-32297357,32298432-322985...    31   1.2  
08_02_0479 + 17627605-17627839,17628965-17629107,17630018-176301...    29   4.7  
11_06_0052 - 19652594-19652703,19653406-19653586,19653659-196537...    28   8.1  

>02_05_0860 -
           32296743-32296769,32297328-32297357,32298432-32298503,
           32298967-32299812
          Length = 324

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 134 MEKPTVTEQPPPYSAAVPPDFPPVTNLVELIFCQSN 241
           M  P V   P P +AAVPP  PP      ++F QSN
Sbjct: 148 MSVPPVPPAPTPTAAAVPPP-PPPQQQTPMLFGQSN 182


>08_02_0479 +
           17627605-17627839,17628965-17629107,17630018-17630137,
           17630497-17630721
          Length = 240

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = +2

Query: 158 QPPPYSAAVPPDFPPVTNLVELIFCQSNSKSLMCFSIFYLFAGGLRDYSSYAQMKLMGST 337
           +P PY+AA  P         EL+F    +  L+C  +F   AG LR   +    KL   +
Sbjct: 21  RPSPYAAAAAPSPDAAAPPAELLFRPRRAAVLIC--LFRGAAGELRVLLTKRSSKLSSHS 78

Query: 338 SENSDP 355
            E S P
Sbjct: 79  GEVSLP 84


>11_06_0052 -
           19652594-19652703,19653406-19653586,19653659-19653717,
           19653873-19654022,19654719-19654827,19654879-19654933,
           19654985-19654989,19656837-19656958,19657181-19657241
          Length = 283

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 238 KFKEFDVLLYLLPICWWPTGLFQLRTDETHGLNI 339
           +FKE D LL +LPI     GL   R+D+  G ++
Sbjct: 222 QFKESDGLLNILPISAESAGLLPSRSDKPQGSDL 255


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,309,608
Number of Sequences: 37544
Number of extensions: 321497
Number of successful extensions: 1288
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)