Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19i13
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062370-1|AAH62370.1|  125|Homo sapiens brain protein I3 protein.     39   0.020
BC018737-1|AAH18737.1|  125|Homo sapiens brain protein I3 protein.     39   0.020
AF106966-1|AAD05167.1|  125|Homo sapiens I3 protein protein.           39   0.020
AF041430-1|AAF18565.2|  125|Homo sapiens pRGR2 protein.                39   0.020
AB055977-1|BAB32785.1|  125|Homo sapiens I3 protein protein.           39   0.020

>BC062370-1|AAH62370.1|  125|Homo sapiens brain protein I3 protein.
          Length = 125

 Score = 38.7 bits (86), Expect = 0.020
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +1

Query: 346 FRSGILCCLALKNRRCSNCGAMF 414
           F  G +CC AL+ RRC NCGA F
Sbjct: 102 FPFGFICCFALRKRRCPNCGATF 124


>BC018737-1|AAH18737.1|  125|Homo sapiens brain protein I3 protein.
          Length = 125

 Score = 38.7 bits (86), Expect = 0.020
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +1

Query: 346 FRSGILCCLALKNRRCSNCGAMF 414
           F  G +CC AL+ RRC NCGA F
Sbjct: 102 FPFGFICCFALRKRRCPNCGATF 124


>AF106966-1|AAD05167.1|  125|Homo sapiens I3 protein protein.
          Length = 125

 Score = 38.7 bits (86), Expect = 0.020
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +1

Query: 346 FRSGILCCLALKNRRCSNCGAMF 414
           F  G +CC AL+ RRC NCGA F
Sbjct: 102 FPFGFICCFALRKRRCPNCGATF 124


>AF041430-1|AAF18565.2|  125|Homo sapiens pRGR2 protein.
          Length = 125

 Score = 38.7 bits (86), Expect = 0.020
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +1

Query: 346 FRSGILCCLALKNRRCSNCGAMF 414
           F  G +CC AL+ RRC NCGA F
Sbjct: 102 FPFGFICCFALRKRRCPNCGATF 124


>AB055977-1|BAB32785.1|  125|Homo sapiens I3 protein protein.
          Length = 125

 Score = 38.7 bits (86), Expect = 0.020
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +1

Query: 346 FRSGILCCLALKNRRCSNCGAMF 414
           F  G +CC AL+ RRC NCGA F
Sbjct: 102 FPFGFICCFALRKRRCPNCGATF 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,143,287
Number of Sequences: 237096
Number of extensions: 1861336
Number of successful extensions: 4909
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4881
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)