Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19i06
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.0  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   3.1  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   3.1  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   7.1  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   7.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 206  DETNTFRFFVIVPFVARHGIATSRPM 129
            +E +    + +VPFV+ H I   RP+
Sbjct: 1028 EEKSRLFHYSVVPFVSNHDILNLRPL 1053


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 288 RRKHVRQRRDPKAYPG 335
           R  H R RR+P+A PG
Sbjct: 110 RPPHPRLRREPEAEPG 125



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 288 RRKHVRQRRDPKAYPG 335
           R  H R RR+P+A PG
Sbjct: 136 RPPHPRLRREPEAEPG 151


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 195 ISFIQRLPADRAEI 236
           ++F QR+PA RAE+
Sbjct: 95  LTFFQRIPAYRAEV 108


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 463 ATPRGCSGCNRRRPCSRSSVVHRLR 389
           A   GC+ CN ++  + + VV+ L+
Sbjct: 67  ALSTGCNKCNEKQKHTANKVVNYLK 91


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 463 ATPRGCSGCNRRRPCSRSSVVHRLR 389
           A   GC+ CN ++  + + VV+ L+
Sbjct: 67  ALSTGCNKCNEKQKHTANKVVNYLK 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,225
Number of Sequences: 438
Number of extensions: 3830
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)