Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19i04
         (726 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0143 - 944169-947273                                             29   3.8  
06_01_0448 - 3162059-3162092,3162636-3162763,3163556-3163597,316...    28   6.6  
09_03_0125 - 12531409-12531442,12531577-12531668,12531747-125323...    28   8.7  

>05_01_0143 - 944169-947273
          Length = 1034

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 251 IFLQNLYSSFAVSNILMHSQNTQTIKTYQNIN 156
           I +QNL SSF     ++HS  T+TI  +++++
Sbjct: 382 IRVQNLVSSFHAEGTIVHSNFTETITRFRDVS 413


>06_01_0448 -
           3162059-3162092,3162636-3162763,3163556-3163597,
           3163697-3163738,3163960-3164059,3164132-3164193,
           3165085-3165169,3168003-3168187
          Length = 225

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +1

Query: 193 CECIKIFETAKEEYKF*RKMDNVTKQLLTDVLNLRWMEFLKKIIKEARMLEN-YEMSYEN 369
           CE     ET    Y+   K+    + L T   NL   + +   +KE   LEN  E+S  N
Sbjct: 80  CEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMN 139

Query: 370 IELSVNFKL 396
           I  S N +L
Sbjct: 140 IRSSKNQQL 148


>09_03_0125 -
           12531409-12531442,12531577-12531668,12531747-12532337,
           12532454-12532789,12532899-12533156,12533867-12533971,
           12534625-12534702,12535464-12535542,12535649-12535723,
           12535828-12535946,12536042-12537106
          Length = 943

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +1

Query: 484 DFSIPEFNVDIGQTRAELDIGGFKLALEINGRIYLRNVKISGAIGFFMREKQMYITCDEL 663
           DF +   N + G  RAEL++  FKL   ++G + L  V  +G I   + +    +  D +
Sbjct: 448 DFFMKFSNHNCGSPRAELNLETFKLRSSVSGTLQL--VDATGCIDVVIPDLPPNVCMDSI 505

Query: 664 KIIPD 678
             I D
Sbjct: 506 YEIND 510


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,349,220
Number of Sequences: 37544
Number of extensions: 329250
Number of successful extensions: 774
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)