BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19h23
(320 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001585-1|AAN71340.1| 411|Drosophila melanogaster RE26090p pro... 52 2e-07
AE013599-2824|AAM68437.1| 411|Drosophila melanogaster CG15111-P... 52 2e-07
AE013599-2823|AAF57599.2| 393|Drosophila melanogaster CG15111-P... 52 2e-07
L49440-1|AAC41609.1| 438|Drosophila melanogaster apoptosis 1 in... 27 4.1
AY118618-1|AAM49987.1| 530|Drosophila melanogaster LP11159p pro... 27 4.1
AE014296-2621|AAN11757.1| 438|Drosophila melanogaster CG12284-P... 27 4.1
AE014296-2620|AAG22319.1| 438|Drosophila melanogaster CG12284-P... 27 4.1
AE014296-2619|AAF49548.1| 438|Drosophila melanogaster CG12284-P... 27 4.1
AE014296-1972|AAS65022.1| 530|Drosophila melanogaster CG33490-P... 27 4.1
Y00228-1|CAA68371.1| 944|Drosophila melanogaster protein ( Dros... 27 7.1
BT003273-1|AAO25030.1| 941|Drosophila melanogaster LD15893p pro... 27 7.1
AE014297-1834|AAF55043.1| 941|Drosophila melanogaster CG8573-PB... 27 7.1
AE014297-1833|AAF55044.1| 941|Drosophila melanogaster CG8573-PA... 27 7.1
AY070939-1|AAL48561.1| 543|Drosophila melanogaster RE03785p pro... 26 9.4
AE014134-2785|AAN10971.1| 543|Drosophila melanogaster CG17932-P... 26 9.4
AE014134-2784|AAF53571.1| 543|Drosophila melanogaster CG17932-P... 26 9.4
>BT001585-1|AAN71340.1| 411|Drosophila melanogaster RE26090p
protein.
Length = 411
Score = 51.6 bits (118), Expect = 2e-07
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 73 LGTAVAANFVSNLEELCQERGSEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSWLPYFK 252
LGT VA + LC + S + R P ++LE+PF N++DEI HP +KL LP+F
Sbjct: 260 LGTGVATH-------LCAKLASLRERAPRGVILESPFTNIRDEIRMHPFAKLYKNLPWFN 312
Query: 253 NTFVKP 270
T +P
Sbjct: 313 FTISQP 318
>AE013599-2824|AAM68437.1| 411|Drosophila melanogaster CG15111-PB,
isoform B protein.
Length = 411
Score = 51.6 bits (118), Expect = 2e-07
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 73 LGTAVAANFVSNLEELCQERGSEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSWLPYFK 252
LGT VA + LC + S + R P ++LE+PF N++DEI HP +KL LP+F
Sbjct: 260 LGTGVATH-------LCAKLASLRERAPRGVILESPFTNIRDEIRMHPFAKLYKNLPWFN 312
Query: 253 NTFVKP 270
T +P
Sbjct: 313 FTISQP 318
>AE013599-2823|AAF57599.2| 393|Drosophila melanogaster CG15111-PA,
isoform A protein.
Length = 393
Score = 51.6 bits (118), Expect = 2e-07
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 73 LGTAVAANFVSNLEELCQERGSEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSWLPYFK 252
LGT VA + LC + S + R P ++LE+PF N++DEI HP +KL LP+F
Sbjct: 242 LGTGVATH-------LCAKLASLRERAPRGVILESPFTNIRDEIRMHPFAKLYKNLPWFN 294
Query: 253 NTFVKP 270
T +P
Sbjct: 295 FTISQP 300
>L49440-1|AAC41609.1| 438|Drosophila melanogaster apoptosis 1
inhibitor protein.
Length = 438
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 218 YRNWFPGCPTSRIRS*NRSPILPTILSRLM 307
++ W P CP R R+ N PI L R++
Sbjct: 100 HQRWSPNCPLLRRRTTNNVPINAEALDRIL 129
>AY118618-1|AAM49987.1| 530|Drosophila melanogaster LP11159p
protein.
Length = 530
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 121 CQERGSEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSWLPY 246
C E G E L+ +++ P ++ D K PL K SW PY
Sbjct: 197 CLEEGEEHLK-----IVKKPQKDIDDR-TKGPLGKKYSWYPY 232
>AE014296-2621|AAN11757.1| 438|Drosophila melanogaster CG12284-PC,
isoform C protein.
Length = 438
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 218 YRNWFPGCPTSRIRS*NRSPILPTILSRLM 307
++ W P CP R R+ N PI L R++
Sbjct: 100 HQRWSPNCPLLRRRTTNNVPINAEALDRIL 129
>AE014296-2620|AAG22319.1| 438|Drosophila melanogaster CG12284-PB,
isoform B protein.
Length = 438
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 218 YRNWFPGCPTSRIRS*NRSPILPTILSRLM 307
++ W P CP R R+ N PI L R++
Sbjct: 100 HQRWSPNCPLLRRRTTNNVPINAEALDRIL 129
>AE014296-2619|AAF49548.1| 438|Drosophila melanogaster CG12284-PA,
isoform A protein.
Length = 438
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 218 YRNWFPGCPTSRIRS*NRSPILPTILSRLM 307
++ W P CP R R+ N PI L R++
Sbjct: 100 HQRWSPNCPLLRRRTTNNVPINAEALDRIL 129
>AE014296-1972|AAS65022.1| 530|Drosophila melanogaster CG33490-PA
protein.
Length = 530
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 121 CQERGSEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSWLPY 246
C E G E L+ +++ P ++ D K PL K SW PY
Sbjct: 197 CLEEGEEHLK-----IVKKPQKDIDDR-TKGPLGKKYSWYPY 232
>Y00228-1|CAA68371.1| 944|Drosophila melanogaster protein (
Drosophila melanogastersu(Hw) gene for suppressor of
hairy wing. ).
Length = 944
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 73 LGTAVAANFVSNLEELCQERG-SEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSW 237
L ++AA NLEE C E S ++ + + L+ L D + P+ K W
Sbjct: 735 LAASLAAAIADNLEESCSEDDFSGEILTEEDIKLKENVGKLIDMLVDPPILKKYGW 790
>BT003273-1|AAO25030.1| 941|Drosophila melanogaster LD15893p
protein.
Length = 941
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 73 LGTAVAANFVSNLEELCQERG-SEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSW 237
L ++AA NLEE C E S ++ + + L+ L D + P+ K W
Sbjct: 735 LAASLAAAIADNLEESCSEDDFSGEILTEEDIKLKENVGKLIDMLVDPPILKKYGW 790
>AE014297-1834|AAF55043.1| 941|Drosophila melanogaster CG8573-PB,
isoform B protein.
Length = 941
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 73 LGTAVAANFVSNLEELCQERG-SEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSW 237
L ++AA NLEE C E S ++ + + L+ L D + P+ K W
Sbjct: 735 LAASLAAAIADNLEESCSEDDFSGEILTEEDIKLKENVGKLIDMLVDPPILKKYGW 790
>AE014297-1833|AAF55044.1| 941|Drosophila melanogaster CG8573-PA,
isoform A protein.
Length = 941
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 73 LGTAVAANFVSNLEELCQERG-SEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSW 237
L ++AA NLEE C E S ++ + + L+ L D + P+ K W
Sbjct: 735 LAASLAAAIADNLEESCSEDDFSGEILTEEDIKLKENVGKLIDMLVDPPILKKYGW 790
>AY070939-1|AAL48561.1| 543|Drosophila melanogaster RE03785p
protein.
Length = 543
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 164 WSWRLPSII*RTKSPNILYRNWFP 235
W W P KS NILY+ W P
Sbjct: 344 WKWEDPKNT-PGKSANILYKKWLP 366
>AE014134-2785|AAN10971.1| 543|Drosophila melanogaster CG17932-PB,
isoform B protein.
Length = 543
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 164 WSWRLPSII*RTKSPNILYRNWFP 235
W W P KS NILY+ W P
Sbjct: 344 WKWEDPKNT-PGKSANILYKKWLP 366
>AE014134-2784|AAF53571.1| 543|Drosophila melanogaster CG17932-PA,
isoform A protein.
Length = 543
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 164 WSWRLPSII*RTKSPNILYRNWFP 235
W W P KS NILY+ W P
Sbjct: 344 WKWEDPKNT-PGKSANILYKKWLP 366
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,960,806
Number of Sequences: 53049
Number of extensions: 263701
Number of successful extensions: 873
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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