Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19h23
         (320 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    29   0.014
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   0.91 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   3.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   3.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   3.7  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    20   8.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   8.4  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 0.014
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 226 LVSWLPYFKNTFVKPFTDSPD 288
           +V WLP+F    V+PF  +PD
Sbjct: 382 IVCWLPFFVLALVRPFLKNPD 402


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 0.91
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 262 VKPFTDSPDYSFTTDE 309
           +K  +D+ DYS TTDE
Sbjct: 224 IKHESDNSDYSHTTDE 239


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 226 LVSWLPYFKNTFVKPF 273
           +V WLP+F    + PF
Sbjct: 337 VVCWLPFFLMYVIVPF 352


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 226 LVSWLPYFKNTFVKPF 273
           +V WLP+F    + PF
Sbjct: 337 VVCWLPFFLMYVIVPF 352


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 226 LVSWLPYFKNTFVKPF 273
           +V WLP+F    + PF
Sbjct: 337 VVCWLPFFLMYVIVPF 352


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 226 LVSWLPYFKNTFVKPF 273
           ++ WLP+F    V+ F
Sbjct: 19  ILCWLPFFTMYLVRAF 34


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 226 LVSWLPYFKNTFVKPF 273
           ++ WLP+F    V+ F
Sbjct: 467 ILCWLPFFTMYLVRAF 482


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,503
Number of Sequences: 438
Number of extensions: 1760
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)