Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19h19
         (571 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60854-1|AAA60583.1|  146|Homo sapiens RPS16 protein.                 138   1e-32
BC007977-1|AAH07977.1|  146|Homo sapiens ribosomal protein S16 p...   138   1e-32
BC004324-1|AAH04324.1|  146|Homo sapiens ribosomal protein S16 p...   138   1e-32
AB061841-1|BAB79479.1|  146|Homo sapiens ribosomal protein S16 p...   138   1e-32
BC071674-1|AAH71674.1|  152|Homo sapiens RPS16 protein protein.       133   4e-31
AK097937-1|BAC85106.1|  178|Homo sapiens protein ( Homo sapiens ...    77   3e-14

>M60854-1|AAA60583.1|  146|Homo sapiens RPS16 protein.
          Length = 146

 Score =  138 bits (334), Expect = 1e-32
 Identities = 62/85 (72%), Positives = 76/85 (89%)
 Frame = +1

Query: 46  PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGXEKFSM 225
           P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG E+F+ 
Sbjct: 6   PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65

Query: 226 VDIRVTVKGGGHVAQVYAITTSYFK 300
           VDIRV VKGGGHVAQ+YAI  S  K
Sbjct: 66  VDIRVRVKGGGHVAQIYAIRQSISK 90



 Score =  119 bits (287), Expect = 6e-27
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = +2

Query: 287 QAISKALIAFYQKYVDEASKKEIXDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 466
           Q+ISKAL+A+YQKYVDEASKKEI DIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSY
Sbjct: 86  QSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSY 145

Query: 467 R 469
           R
Sbjct: 146 R 146


>BC007977-1|AAH07977.1|  146|Homo sapiens ribosomal protein S16
           protein.
          Length = 146

 Score =  138 bits (334), Expect = 1e-32
 Identities = 62/85 (72%), Positives = 76/85 (89%)
 Frame = +1

Query: 46  PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGXEKFSM 225
           P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG E+F+ 
Sbjct: 6   PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65

Query: 226 VDIRVTVKGGGHVAQVYAITTSYFK 300
           VDIRV VKGGGHVAQ+YAI  S  K
Sbjct: 66  VDIRVRVKGGGHVAQIYAIRQSISK 90



 Score =  119 bits (287), Expect = 6e-27
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = +2

Query: 287 QAISKALIAFYQKYVDEASKKEIXDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 466
           Q+ISKAL+A+YQKYVDEASKKEI DIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSY
Sbjct: 86  QSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSY 145

Query: 467 R 469
           R
Sbjct: 146 R 146


>BC004324-1|AAH04324.1|  146|Homo sapiens ribosomal protein S16
           protein.
          Length = 146

 Score =  138 bits (334), Expect = 1e-32
 Identities = 62/85 (72%), Positives = 76/85 (89%)
 Frame = +1

Query: 46  PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGXEKFSM 225
           P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG E+F+ 
Sbjct: 6   PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65

Query: 226 VDIRVTVKGGGHVAQVYAITTSYFK 300
           VDIRV VKGGGHVAQ+YAI  S  K
Sbjct: 66  VDIRVRVKGGGHVAQIYAIRQSISK 90



 Score =  119 bits (287), Expect = 6e-27
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = +2

Query: 287 QAISKALIAFYQKYVDEASKKEIXDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 466
           Q+ISKAL+A+YQKYVDEASKKEI DIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSY
Sbjct: 86  QSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSY 145

Query: 467 R 469
           R
Sbjct: 146 R 146


>AB061841-1|BAB79479.1|  146|Homo sapiens ribosomal protein S16
           protein.
          Length = 146

 Score =  138 bits (334), Expect = 1e-32
 Identities = 62/85 (72%), Positives = 76/85 (89%)
 Frame = +1

Query: 46  PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGXEKFSM 225
           P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG E+F+ 
Sbjct: 6   PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65

Query: 226 VDIRVTVKGGGHVAQVYAITTSYFK 300
           VDIRV VKGGGHVAQ+YAI  S  K
Sbjct: 66  VDIRVRVKGGGHVAQIYAIRQSISK 90



 Score =  119 bits (287), Expect = 6e-27
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = +2

Query: 287 QAISKALIAFYQKYVDEASKKEIXDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 466
           Q+ISKAL+A+YQKYVDEASKKEI DIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSY
Sbjct: 86  QSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSY 145

Query: 467 R 469
           R
Sbjct: 146 R 146


>BC071674-1|AAH71674.1|  152|Homo sapiens RPS16 protein protein.
          Length = 152

 Score =  133 bits (322), Expect = 4e-31
 Identities = 58/77 (75%), Positives = 72/77 (93%)
 Frame = +1

Query: 46  PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGXEKFSM 225
           P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLG E+F+ 
Sbjct: 6   PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65

Query: 226 VDIRVTVKGGGHVAQVY 276
           VDIRV VKGGGHVAQ+Y
Sbjct: 66  VDIRVRVKGGGHVAQIY 82


>AK097937-1|BAC85106.1|  178|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40618 fis, clone THYMU2013089, moderately
           similar to 40S RIBOSOMAL PROTEIN S16. ).
          Length = 178

 Score = 77.4 bits (182), Expect = 3e-14
 Identities = 37/78 (47%), Positives = 52/78 (66%)
 Frame = +1

Query: 49  IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGXEKFSMV 228
           +Q+VQ+F  K+ A AV  C+ G G +R+N  PL+++    LQYKL E  LLL  E+ + +
Sbjct: 18  LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77

Query: 229 DIRVTVKGGGHVAQVYAI 282
           DI V VKG GHV Q+YA+
Sbjct: 78  DIHVRVKGSGHVVQIYAV 95



 Score = 33.5 bits (73), Expect = 0.54
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +2

Query: 287 QAISKALIAFYQKYVDEASKKEIXDILVQ 373
           Q ISKAL+  Y KYVDEAS +EI D L +
Sbjct: 97  QYISKALVPCYPKYVDEAS-EEIKDTLTR 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,659,645
Number of Sequences: 237096
Number of extensions: 2013431
Number of successful extensions: 4664
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4664
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)