Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19h19
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   150   1e-36
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   150   1e-36
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    31   1.4  
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    31   1.4  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  150 bits (363), Expect = 1e-36
 Identities = 68/92 (73%), Positives = 82/92 (89%)
 Frame = +1

Query: 25  VQEARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL 204
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 205 GXEKFSMVDIRVTVKGGGHVAQVYAITTSYFK 300
           G EKF+ VDIRV V GGGHVAQ+YAI  +  K
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score =  124 bits (298), Expect = 1e-28
 Identities = 57/61 (93%), Positives = 59/61 (96%)
 Frame = +2

Query: 287 QAISKALIAFYQKYVDEASKKEIXDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 466
           QAISKAL+AFYQKYVDEASKKEI DILVQYDR+LLV DPRRCEPKKFGGPGARARYQKSY
Sbjct: 88  QAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSY 147

Query: 467 R 469
           R
Sbjct: 148 R 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  150 bits (363), Expect = 1e-36
 Identities = 68/92 (73%), Positives = 82/92 (89%)
 Frame = +1

Query: 25  VQEARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL 204
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 205 GXEKFSMVDIRVTVKGGGHVAQVYAITTSYFK 300
           G EKF+ VDIRV V GGGHVAQ+YAI  +  K
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISK 92



 Score =  124 bits (298), Expect = 1e-28
 Identities = 57/61 (93%), Positives = 59/61 (96%)
 Frame = +2

Query: 287 QAISKALIAFYQKYVDEASKKEIXDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 466
           QAISKAL+AFYQKYVDEASKKEI DILVQYDR+LLV DPRRCEPKKFGGPGARARYQKSY
Sbjct: 88  QAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSY 147

Query: 467 R 469
           R
Sbjct: 148 R 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +1

Query: 76  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGXEKFSMVDIRVTVKG 252
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 253 GGHVAQVYAI 282
           GG   Q  AI
Sbjct: 334 GGPSGQAGAI 343



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +2

Query: 386 LLVADPRRCEPKKFGGPGARARY 454
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +1

Query: 76  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGXEKFSMVDIRVTVKG 252
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 253 GGHVAQVYAI 282
           GG   Q  AI
Sbjct: 334 GGPSGQAGAI 343



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +2

Query: 386 LLVADPRRCEPKKFGGPGARARY 454
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,713,513
Number of Sequences: 53049
Number of extensions: 563546
Number of successful extensions: 1494
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)