Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19h05
(715 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein. 34 0.44
BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein. 34 0.44
BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein. 34 0.44
AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and chloride-ac... 34 0.44
AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel, subf... 34 0.44
AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel, subf... 34 0.44
AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel, subf... 34 0.44
AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel, subf... 34 0.44
AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel, subf... 34 0.44
AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel, subf... 34 0.44
AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel, subf... 34 0.44
AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel, subf... 34 0.44
AL441925-1|CAI13284.1| 243|Homo sapiens small nuclear RNA activ... 30 9.5
>BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein.
Length = 1068
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and
chloride-activated ATP-sensitive potassium channel
protein.
Length = 1135
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 34.3 bits (75), Expect = 0.44
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 172
N+ + L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 130 NIWEQILRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL441925-1|CAI13284.1| 243|Homo sapiens small nuclear RNA
activating complex, polypeptideP22 homolog) 5 (S.
cerevisiae) protein.
Length = 243
Score = 29.9 bits (64), Expect = 9.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 353 LNTNYIIVKHKDLYTSCFFFF 415
+N Y ++ HKDLY S FF+F
Sbjct: 184 VNILYPVIFHKDLYKSAFFYF 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,552,879
Number of Sequences: 237096
Number of extensions: 1966108
Number of successful extensions: 7251
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7240
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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