Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19h05
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88169-3|AAK68396.1|  345|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U88169-2|AAB42234.1|  342|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF003385-7|AAB54247.1|  381|Caenorhabditis elegans Serpentine re...    28   5.8  
Z83115-4|CAB05557.3|  422|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical pr...    28   7.6  
L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid desa...    28   7.6  
L26291-1|AAA72418.1|  422|Caenorhabditis elegans protein ( Caeno...    28   7.6  
AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical ...    28   7.6  
AL117202-2|CAB55092.1|  302|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U88169-3|AAK68396.1|  345|Caenorhabditis elegans Hypothetical
           protein T03F1.6b protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 433 YSQRFIYR-IK*LKT*VDEGDIMMQFVNFEKRVTN 534
           + +R IYR IK L+  V + D  + F+N + RVTN
Sbjct: 45  FVERIIYREIKALRVEVHDNDYSVYFINKDSRVTN 79


>U88169-2|AAB42234.1|  342|Caenorhabditis elegans Hypothetical
           protein T03F1.6a protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 433 YSQRFIYR-IK*LKT*VDEGDIMMQFVNFEKRVTN 534
           + +R IYR IK L+  V + D  + F+N + RVTN
Sbjct: 45  FVERIIYREIKALRVEVHDNDYSVYFINKDSRVTN 79


>AF003385-7|AAB54247.1|  381|Caenorhabditis elegans Serpentine
           receptor, class w protein7 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = -3

Query: 557 YLKNK*QKFVTRFSKLTNCIIISPSSTHVFNYLILYINR*EYLQQEEKRKRN 402
           YL    +K V +F+   +CI +  S+ +VF  L L +     LQ+ +KR++N
Sbjct: 216 YLLLNNEKLVDKFNYADSCISLVVSTLYVFVALALVVE----LQRTKKRRKN 263


>Z83115-4|CAB05557.3|  422|Caenorhabditis elegans Hypothetical
           protein K11D2.3a protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/50 (30%), Positives = 30/50 (60%)
 Frame = +2

Query: 302 LIKCKMDGSFRGISLTFLNTNYIIVKHKDLYTSCFFFFSLLVVNILNDLY 451
           L++ + +GS   + LT+ +TN++ +KH ++Y       ++ V  IL+ LY
Sbjct: 37  LMEKEEEGSAAPV-LTYQDTNFVFIKHTNIYLVSACRSNVNVTMILSFLY 85


>Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical
           protein C27A7.7 protein.
          Length = 336

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 541 YLFLRYYGVC-SCYFYYFKREIIVLPYLYQYVGYC 642
           YL L ++  C  C F+     ++ L ++Y+YV  C
Sbjct: 85  YLDLGFFAPCVRCMFFSLSYGVLELHFIYRYVALC 119


>L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid
           desaturase protein.
          Length = 402

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 80  ITNFKYKMNIFRGLVILYMSLFVLIYFGFVGALLY 184
           + + +Y +  F  L ILY +L    YFG  G L++
Sbjct: 73  VKSIRYLVQDFAALTILYFALPAFEYFGLFGYLVW 107


>L26291-1|AAA72418.1|  422|Caenorhabditis elegans protein (
           Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
          Length = 422

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/50 (30%), Positives = 30/50 (60%)
 Frame = +2

Query: 302 LIKCKMDGSFRGISLTFLNTNYIIVKHKDLYTSCFFFFSLLVVNILNDLY 451
           L++ + +GS   + LT+ +TN++ +KH ++Y       ++ V  IL+ LY
Sbjct: 37  LMEKEEEGSAAPV-LTYQDTNFVFIKHTNIYLVSACRSNVNVTMILSFLY 85


>AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical
           protein Y67H2A.8 protein.
          Length = 402

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 80  ITNFKYKMNIFRGLVILYMSLFVLIYFGFVGALLY 184
           + + +Y +  F  L ILY +L    YFG  G L++
Sbjct: 73  VKSIRYLVQDFAALTILYFALPAFEYFGLFGYLVW 107


>AL117202-2|CAB55092.1|  302|Caenorhabditis elegans Hypothetical
           protein Y47D3A.2 protein.
          Length = 302

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -2

Query: 351 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSEN 196
           NV+D+ +   + LH   ++PFL+  +I   FK     H   +   T K + N
Sbjct: 231 NVRDVLVKSSNFLHCYIHLPFLNIQEIATIFKPDFSNHSAETFTMTLKETVN 282


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,929,002
Number of Sequences: 27780
Number of extensions: 356358
Number of successful extensions: 1164
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)