Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19h03
(599 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0126 - 5543658-5543670,5543748-5543840,5544344-5544529,554... 33 0.23
08_01_0242 - 2007601-2007677,2007792-2007843,2008117-2008188,200... 32 0.31
10_08_0650 - 19591898-19593148 31 0.70
09_04_0627 - 19061106-19061474,19062067-19062909,19063395-190635... 31 0.70
10_08_0992 + 22079548-22079880,22080668-22080753,22081614-22081779 29 3.8
10_08_0600 - 19098312-19099439 29 3.8
08_02_0085 + 12108474-12108552,12108656-12108759,12109726-121099... 29 3.8
08_01_1025 + 10361064-10361237,10361807-10361877,10362001-103622... 29 3.8
04_04_0666 + 27086568-27086975,27087073-27087477,27088542-270886... 29 3.8
01_01_0100 - 755894-756662,757086-757598,758718-761050 28 5.0
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 28 6.6
07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392 28 6.6
06_01_0223 - 1709897-1709912,1710188-1712520 28 6.6
05_04_0111 - 18079051-18079970,18080384-18080462 28 6.6
04_04_0898 + 29220860-29221462,29221547-29222545 28 6.6
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 28 6.6
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626... 28 6.6
09_01_0027 - 469856-470773,470780-471261,471296-471408,471453-47... 27 8.7
08_01_0475 - 4185534-4186047,4187437-4187708,4188032-4188979,419... 27 8.7
04_03_0013 + 9393423-9393747,9396577-9396657,9397491-9397594,939... 27 8.7
03_06_0228 - 32504637-32505025,32505392-32505449 27 8.7
>10_02_0126 -
5543658-5543670,5543748-5543840,5544344-5544529,
5544613-5545310,5545323-5546237,5546842-5547081
Length = 714
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 159 LANPPEPPKINWDE--YQKSVPIPGLVDKFKKEYEAFKVPFPQDTLTSKVEEQWKELEPQ 332
L PP PPK+ +E QK P+P + + A ++P P+ + V EP+
Sbjct: 375 LGKPPRPPKMKAEEPEMQKENPVPDVPPEIVVPKAAMEIPVPEVPMEITV------AEPE 428
Query: 333 IKAFCANLQKEIE 371
++ F A++ EIE
Sbjct: 429 VQ-FVASVGSEIE 440
>08_01_0242 -
2007601-2007677,2007792-2007843,2008117-2008188,
2008710-2009219
Length = 236
Score = 32.3 bits (70), Expect = 0.31
Identities = 24/85 (28%), Positives = 49/85 (57%)
Frame = +3
Query: 174 EPPKINWDEYQKSVPIPGLVDKFKKEYEAFKVPFPQDTLTSKVEEQWKELEPQIKAFCAN 353
+PP ++ E+ K++ LV KK ++A P + +++ + KEL+ + +
Sbjct: 147 QPPALDLAEHPKAMS-HALVLAAKK-FDALVSALPLSSEEDQLK-RIKELQAENEVVGTE 203
Query: 354 LQKEIEASQKELQRIKSLPKFEEMT 428
LQK++EA++ EL+++++L F E T
Sbjct: 204 LQKQLEAAELELKQVEAL--FNEAT 226
>10_08_0650 - 19591898-19593148
Length = 416
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 138 DSYLRRVLANPPEPPKINWDEYQKS-VPIPGLVDKFKKEYEAFKVPFPQDTLTSKVEEQW 314
+S+L R ++ P Y+ S VP+P +++ YE KV P D L + +W
Sbjct: 120 ESHLVRAVSGDEVPLPPCGSRYELSEVPLPPCGSRYELRYELSKVILPDDPLAAAASGEW 179
>09_04_0627 -
19061106-19061474,19062067-19062909,19063395-19063501,
19064301-19064332,19064384-19064663,19065092-19065475,
19066730-19066803,19067244-19067310,19067415-19067486,
19067941-19068000,19068683-19068734,19068874-19068943,
19069110-19069372
Length = 890
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +3
Query: 306 EQWKELEPQIKAFCANLQ----KEIEASQKELQRIKSLPKFEEMTMEMFYELYPDQALD 470
E+ ELE + + N++ KE E + ++ +K++ KFE ++ F + +PD +LD
Sbjct: 111 EELAELEARRERVKQNIELLKKKEEEEKKTGVRPVKTVGKFESPNLKSFIQQFPDTSLD 169
>10_08_0992 + 22079548-22079880,22080668-22080753,22081614-22081779
Length = 194
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 252 YEAFKVPFPQDTLTSKVEEQWKELEPQIKAFCANLQKEIEASQKELQRIKSLPKFEEM-T 428
Y V +PQ + T+ E Q +E+ + K + A+ +QR LPK + T
Sbjct: 124 YHQLNVIWPQPSNTTDRERQKQEVTGSKLQAIGSSWKALHANAPRMQRCLRLPKLSTLIT 183
Query: 429 MEMFY 443
M +F+
Sbjct: 184 MTLFF 188
>10_08_0600 - 19098312-19099439
Length = 375
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 231 VDKFKKEYEAFKVPFPQD-TLTS---KVEEQWKELEPQIKAFCANLQKEIEASQKELQRI 398
VDK + E AFK+ FP LT K ++W++L P I + ++QK + + +
Sbjct: 190 VDKTRPEKHAFKLQFPPGFRLTKEYRKKVKEWQQL-PYISPYEVSIQKGVGSKRVSKMAR 248
Query: 399 KSLPK 413
K + K
Sbjct: 249 KKMEK 253
>08_02_0085 +
12108474-12108552,12108656-12108759,12109726-12109925,
12110003-12110103,12110184-12110379,12110584-12110745,
12110856-12110937,12111741-12112004,12113047-12113174,
12113795-12113957
Length = 492
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 174 EPPKINWDEYQKSVPIPGLV 233
+P I+WDEY V IPG+V
Sbjct: 468 DPKSIDWDEYFYKVHIPGVV 487
>08_01_1025 +
10361064-10361237,10361807-10361877,10362001-10362235,
10362317-10362520
Length = 227
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +3
Query: 306 EQWKELEPQIKAFCANLQKEIEASQKELQRIKSLPK----FEEMTMEMFYELYPDQALDP 473
+ +KEL + +A LQ E Q+ L +K L K E + F + AL P
Sbjct: 51 QDYKELLEETEAKKKRLQMEKLKKQRLLAEVKFLRKRYKSMSENPSQTFVYRVKNPALPP 110
Query: 474 VNKPTFWPHTPEEQGVSPEKTSTKG 548
+ W H E V +S+KG
Sbjct: 111 TLRQPGWSHGEEYHTVRAIGSSSKG 135
>04_04_0666 +
27086568-27086975,27087073-27087477,27088542-27088635,
27088731-27088768,27088853-27088999,27089167-27089266,
27090001-27090953,27091512-27091569,27092904-27093022
Length = 773
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -2
Query: 373 ASISFCKFAQKALIWGSSSFHCSSTFDVSVS*G 275
A IS + KALIWGSS VS S G
Sbjct: 110 ADISDVRLTSKALIWGSSLLSLEDVISVSYSSG 142
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = +3
Query: 195 DEYQKSVPIPGLVDKFKKEYEAFKVPFPQDTLTSKVEEQWKELEPQ----IKAFCANLQK 362
D+ + ++D + F Q++ E + KE+ + +K ++
Sbjct: 288 DDLETEASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMKCEWPKIRD 347
Query: 363 EIEASQKELQRIKSLPKFEEMTMEMFYELYPDQALDPVNKPTFWPHTPEEQGV 521
+ +EL R+K + K E+M +E+F + ++ + K H EEQ +
Sbjct: 348 KELYFYRELARVKKVKKNEDMAVEIFKN--QETKIEQIKKKEQDEHDKEEQNL 398
>08_02_1453 - 27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 255 EAFKVPFPQDTLTSKVEEQWKELEPQIKAFCANLQKEIE---ASQKELQRIKSLPKFEEM 425
E F + + D++ K+ + +L + CA+ KE++ S K+++ ++ + EE
Sbjct: 1354 EEFIIGYHCDSIVCKMHDLMHDLAKDVTDECASTTKELDQLKGSIKDVRHLRIPEEMEET 1413
Query: 426 TMEMF 440
E+F
Sbjct: 1414 MTELF 1418
>07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392
Length = 313
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 156 VLANPPEPPKINWDEYQKSVPIPGLVDKFKKEYEAFKVPFPQDTLT 293
V NP E P I WD + S P K K+ + VP ++TLT
Sbjct: 90 VRLNPNEDPNITWDTHVNSDCDPSNYQKVTKKKKC-PVPGCRETLT 134
>06_01_0223 - 1709897-1709912,1710188-1712520
Length = 782
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = +3
Query: 195 DEYQKSVPIPGLVDKFKKEYEAFKVPFPQDTLTSKVEEQWKELEPQ----IKAFCANLQK 362
D+ + ++D + F Q++ E + KE+ + IK ++
Sbjct: 288 DDLETEASDRNIIDNRRHSVSEFMKKLDQESEIKYYENKLKEINEEYNKSIKCEWPKIRD 347
Query: 363 EIEASQKELQRIKSLPKFEEMTMEMFYELYPDQALDPVNKPTFWPHTPEEQGV 521
+ +EL R+K + K E+M +E+F + ++ + + H EEQ +
Sbjct: 348 KELYFYRELARVKKVKKNEDMAVEIFKN--QETKIEQIKRKEQDKHGKEEQNL 398
>05_04_0111 - 18079051-18079970,18080384-18080462
Length = 332
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = +3
Query: 195 DEYQKSVPIPGLVDKFKKEYEAFKVPFPQDTLTSKVEEQWKELEPQ----IKAFCANLQK 362
D+ + ++DK + F Q++ E + KE+ + +K ++
Sbjct: 150 DDLETEASDRNIIDKRRHSISEFMEKLDQESEIKYYENKLKEINEEYNNSMKCEWPKIRD 209
Query: 363 EIEASQKELQRIKSLPKFEEMTMEMFYELYPDQALDPVNKPTFWPHTPEEQGV 521
+ +EL R+K + K E+M +E+F + ++ + + H EEQ +
Sbjct: 210 KELYFYRELARVKKVKKNEDMAVEIFKN--QETKIEQIKRIEQDKHGKEEQNL 260
>04_04_0898 + 29220860-29221462,29221547-29222545
Length = 533
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 93 PPEQKTNFFAFKGKVDSYLRRVLANPPEPPKINWDEYQKSVPIPGLVDKFKKEYE 257
PP+ T++ + K +S L L NP PP + D+ + S P L D E +
Sbjct: 4 PPQPPTSYPSSYTKFNSALNAGLLNPMSPPPLPLDKTRSS---PTLFDMMANEQD 55
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 324 EPQIKAFCANLQKEIEASQKELQRIKSLPKFEEMTMEM 437
E +K NL++E+ +Q+E++RI+S+P MEM
Sbjct: 8 EEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEM 45
>01_06_1659 +
38961637-38961639,38962361-38962433,38962531-38962613,
38962732-38962858,38962950-38963029,38963112-38963228,
38963393-38963527,38963714-38963883,38963970-38964087
Length = 301
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 117 FAFKGKVDSYLRRVLANPPEPPKINWDEY-QKSVPIPGLVDKFKKEYEAFK 266
+ + G V Y+R + PE + ++ EY +K + G+ +KK + A +
Sbjct: 195 YIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIR 245
>09_01_0027 -
469856-470773,470780-471261,471296-471408,471453-472003,
472089-472328
Length = 767
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = +3
Query: 159 LANPPEPPK------INWDEYQKSVPIPGLVDKFKKEYEAFKVPFPQDTLTSKVEEQWKE 320
L PP PPK E QK P+P + + A ++P P+ + V
Sbjct: 520 LGKPPRPPKRKVTDKAEEPEMQKDNPVPEVPPEIAVPEAAMEIPVPEVPMEITV------ 573
Query: 321 LEPQIKAFCANLQKEIE 371
EP+++ F A++ EIE
Sbjct: 574 AEPEVQ-FVASVGSEIE 589
>08_01_0475 -
4185534-4186047,4187437-4187708,4188032-4188979,
4190096-4190387,4190486-4191357,4192298-4192354,
4192391-4192504,4192966-4193595
Length = 1232
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 117 FAFKGKVDSYLRRVLANPPEPPKINWDEY 203
F +G+ Y+ +++ N PPK ++DEY
Sbjct: 374 FQREGRASEYIDKLIRNTKFPPKGSFDEY 402
>04_03_0013 +
9393423-9393747,9396577-9396657,9397491-9397594,
9397777-9397832,9398713-9398807,9400900-9401067,
9401181-9401341
Length = 329
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 90 VPPEQKTNFFAFKGKVDSYLRRVLANPPEPPKINWDEYQKSVPIPGLVDKFKKEYEAFKV 269
+PPE F + D + V NP +I W EY+K +P L+ + +
Sbjct: 129 IPPEIAQAFLDYH---DIPYKVVEVNPLSKKEIKWSEYKK---VPILMQRVR-------- 174
Query: 270 PFPQDTLTSKVEEQWK 317
P D T++ EE+W+
Sbjct: 175 --PDDKATNEEEEKWR 188
>03_06_0228 - 32504637-32505025,32505392-32505449
Length = 148
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 185 FRRLRRVCQYSSQVRVDFTFKSKEI 111
FR RVC+Y ++DF KS+EI
Sbjct: 118 FRHFPRVCEYVESFKIDFP-KSREI 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,349,792
Number of Sequences: 37544
Number of extensions: 306054
Number of successful extensions: 1038
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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