Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19g09
         (114 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64839-1|AAB04844.2|  399|Caenorhabditis elegans Acyltransferase...    29   0.58 
AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical ...    26   3.1  
Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical pr...    25   7.1  
Z83129-10|CAM84807.1|  262|Caenorhabditis elegans Hypothetical p...    25   9.4  
Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical pr...    25   9.4  
AF067211-6|AAC16989.1|  308|Caenorhabditis elegans Serpentine re...    25   9.4  
AF067211-5|AAW88420.1|  329|Caenorhabditis elegans Serpentine re...    25   9.4  

>U64839-1|AAB04844.2|  399|Caenorhabditis elegans
           Acyltransferase-like protein 9 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.58
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 114 FFFYWAYIFILLFTIIHSFY 55
           F FYWA I  + +  +H FY
Sbjct: 351 FMFYWAIIACVFYAAVHKFY 370


>AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical
           protein Y68A4A.2 protein.
          Length = 309

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 111 FFYWAYIFILLFTIIHSFYL 52
           F Y+ + FI+++TI+  FYL
Sbjct: 27  FLYFFFAFIIIYTILLPFYL 46


>Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical
           protein F20E11.1 protein.
          Length = 331

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 111 FFYWAYIFILLFTIIHSFYL 52
           F Y+ + FI+++TI+  FY+
Sbjct: 27  FLYFFFAFIIIYTILLPFYV 46


>Z83129-10|CAM84807.1|  262|Caenorhabditis elegans Hypothetical
           protein W06G6.15 protein.
          Length = 262

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 8/20 (40%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 102 WAYI-FILLFTIIHSFYLRV 46
           W ++ F+LL +++H FY R+
Sbjct: 108 WVWVVFVLLLSMVHLFYARL 127


>Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical
           protein F59F3.1 protein.
          Length = 1227

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 111 FFYWAYIFILLFTIIHSFYLRVTC 40
           FFYW    +LL +II  F L  TC
Sbjct: 766 FFYWFLALLLLISIIAVFLL--TC 787


>AF067211-6|AAC16989.1|  308|Caenorhabditis elegans Serpentine
           receptor, class z protein85, isoform a protein.
          Length = 308

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 111 FFYWAYIFILLFTII 67
           F YWA+ FIL F +I
Sbjct: 148 FLYWAHWFILSFEVI 162


>AF067211-5|AAW88420.1|  329|Caenorhabditis elegans Serpentine
           receptor, class z protein85, isoform b protein.
          Length = 329

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 111 FFYWAYIFILLFTII 67
           F YWA+ FIL F +I
Sbjct: 169 FLYWAHWFILSFEVI 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,641,042
Number of Sequences: 27780
Number of extensions: 30777
Number of successful extensions: 129
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 12,740,198
effective HSP length: 19
effective length of database: 12,212,378
effective search space used: 219822804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)