Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19g09
         (114 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               25   0.11 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   0.26 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   0.26 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   0.45 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   3.2  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              19   4.2  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   4.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   7.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   7.4  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 0.11
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 93 IFILLFTIIHSFYLRVTCTS*TIC 22
          I ILLFT+    Y+ V C   T+C
Sbjct: 4  IVILLFTLCIVSYMMVRCDDITLC 27


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 108 FYWAYIFILLFTIIHSFYLRV 46
           F WAY+  L+F I+  FY R+
Sbjct: 225 FIWAYVIPLIFIIL--FYSRL 243


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 108 FYWAYIFILLFTIIHSFYLRV 46
           F WAY+  L+F I+  FY R+
Sbjct: 225 FIWAYVIPLIFIIL--FYSRL 243


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 0.45
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 70  HSQFLLACNMYVVDNMSGQS 11
           H++ +  CNM+   N+SG S
Sbjct: 712 HNRNVTTCNMFRKTNLSGDS 731


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 1   TYSMTAPTYCL 33
           TYS T P++C+
Sbjct: 185 TYSETGPSHCV 195


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 43  CYTQVKTVND 72
           C T+ KT+ND
Sbjct: 122 CITKFKTIND 131


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
          protein MRJP6 protein.
          Length = 437

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 15 CPDILSTTYMLHASKNCE 68
          C D+ S  +   +SKN E
Sbjct: 15 CQDVTSAIHQRKSSKNLE 32


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
          transporter-1B protein.
          Length = 593

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +1

Query: 28 CLRRTCYTQVKTVND 72
          CL+ + + ++KT+ D
Sbjct: 4  CLQSSAFKEIKTLPD 18


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +1

Query: 28  CLRRTCYTQVKTVND 72
           CL+ + + ++KT+ D
Sbjct: 57  CLQSSAFKEIKTLPD 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,886
Number of Sequences: 438
Number of extensions: 298
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used:  2630721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)