Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19g03
(432 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical pr... 28 2.5
AJ512486-1|CAD54736.1| 559|Caenorhabditis elegans core alpha-6-... 28 2.5
AF022968-8|AAN84870.1| 559|Caenorhabditis elegans Fucosyl trans... 28 2.5
Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 7.7
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 27 7.7
Z83109-6|CAB05522.1| 362|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 276 LFSCLLHDQTLSRNSKVLYEKKETACYF 359
LFSC++ + L ++ +V YEK+ + C F
Sbjct: 37 LFSCVVFRKGLHKSLEVAYEKEASGCRF 64
>Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 276 LFSCLLHDQTLSRNSKVLYEKKETACYF 359
LFSC++ + L ++ +V YEK+ + C F
Sbjct: 37 LFSCVVFRKGLHKSLEVAYEKEASGCRF 64
>AJ512486-1|CAD54736.1| 559|Caenorhabditis elegans core
alpha-6-fucosyltransferase protein.
Length = 559
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 255 LYDRLRSLFSCLLHDQTLSRNSKVLYE 335
L DR+R +F LLH QT+ ++K+L E
Sbjct: 116 LDDRIREMFY-LLHSQTIENSTKILLE 141
>AF022968-8|AAN84870.1| 559|Caenorhabditis elegans Fucosyl
transferase protein 8 protein.
Length = 559
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 255 LYDRLRSLFSCLLHDQTLSRNSKVLYE 335
L DR+R +F LLH QT+ ++K+L E
Sbjct: 116 LDDRIREMFY-LLHSQTIENSTKILLE 141
>Z81489-4|CAB04010.1| 361|Caenorhabditis elegans Hypothetical
protein C55A1.5 protein.
Length = 361
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/64 (20%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +3
Query: 228 HAALSLWMRLYDRLRSLFSCL--LHDQTLSRNSKVLYEKKETACYFASIILVVFVFLFNK 401
+ A+ ++ ++ ++L+ + + L LH Q + ++ T C FA ++ ++++ +FN
Sbjct: 230 YCAVVMYQKMEEKLQLVSASLRELHRQFFK--TLIMQILSPTICLFAPVVFIIYLPIFNF 287
Query: 402 DITI 413
+++I
Sbjct: 288 EVSI 291
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 235 HCPSGCACTTDCVHSS-VVCFMTKHC 309
HC GCAC + + SS C+ K C
Sbjct: 523 HCGQGCACASGYLRSSDGECYKPKDC 548
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 235 HCPSGCACTTDCVHSS-VVCFMTKHC 309
HC GCAC + + SS C+ K C
Sbjct: 588 HCGQGCACASGYLRSSDGECYKPKDC 613
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 226 NMPHCPSGCACTTDCVHSSVVCFMTKHC 309
N C SGCAC V + VC + C
Sbjct: 411 NSTTCTSGCACIRGYVRINGVCELMSKC 438
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 226 NMPHCPSGCACTTDCVHSSVVCFMTKHC 309
N C SGCAC V + VC + C
Sbjct: 411 NSTTCTSGCACIRGYVRINGVCELMSKC 438
>Z83109-6|CAB05522.1| 362|Caenorhabditis elegans Hypothetical
protein F44G3.11 protein.
Length = 362
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/62 (20%), Positives = 32/62 (51%)
Frame = +3
Query: 228 HAALSLWMRLYDRLRSLFSCLLHDQTLSRNSKVLYEKKETACYFASIILVVFVFLFNKDI 407
+ A +++++ ++L+ L + + + V+ T C F+ +I ++F LFN +I
Sbjct: 242 YCATIMYLKMEEKLKLLSVSIRNLHRQFYKTLVIQIFTPTICLFSPLIFIIFHPLFNVEI 301
Query: 408 TI 413
+
Sbjct: 302 VV 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,202,644
Number of Sequences: 27780
Number of extensions: 204661
Number of successful extensions: 517
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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