Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19f19
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 31 0.61
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 3.2
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 3.2
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 3.2
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 3.2
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 3.2
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 3.2
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 3.2
Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical p... 27 9.9
AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin monoox... 27 9.9
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 417 GQENGNPKIQKNVKDVIPESRLAQFYGNFYYDEDREKCYTNPNERLNPRTYNGN 578
G G+ + + K VI E +A +G Y D DRE+ + + + R GN
Sbjct: 193 GGGKGDTRKTREAKSVIEEREIASGFGGGYEDRDRERSGSRDRRQDSYRNGGGN 246
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 420 QENGNPKIQKNVKDVIPESRLAQFYGNFYYDEDREKC 530
Q G + K + + + R +F FY+D DR+KC
Sbjct: 914 QPAGKSCLDKFDERYLEDCRHGEFTNRFYFDHDRKKC 950
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 420 QENGNPKIQKNVKDVIPESRLAQFYGNFYYDEDREKC 530
Q G + K + + + R +F FY+D DR+KC
Sbjct: 1128 QPAGKSCLDKFDERYLEDCRHGEFTNRFYFDHDRKKC 1164
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 420 QENGNPKIQKNVKDVIPESRLAQFYGNFYYDEDREKC 530
Q G + K + + + R +F FY+D DR+KC
Sbjct: 1264 QPAGKSCLDKFDERYLEDCRHGEFTNRFYFDHDRKKC 1300
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 420 QENGNPKIQKNVKDVIPESRLAQFYGNFYYDEDREKC 530
Q G + K + + + R +F FY+D DR+KC
Sbjct: 1313 QPAGKSCLDKFDERYLEDCRHGEFTNRFYFDHDRKKC 1349
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 420 QENGNPKIQKNVKDVIPESRLAQFYGNFYYDEDREKC 530
Q G + K + + + R +F FY+D DR+KC
Sbjct: 1305 QPAGKSCLDKFDERYLEDCRHGEFTNRFYFDHDRKKC 1341
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 420 QENGNPKIQKNVKDVIPESRLAQFYGNFYYDEDREKC 530
Q G + K + + + R +F FY+D DR+KC
Sbjct: 1316 QPAGKSCLDKFDERYLEDCRHGEFTNRFYFDHDRKKC 1352
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 420 QENGNPKIQKNVKDVIPESRLAQFYGNFYYDEDREKC 530
Q G + K + + + R +F FY+D DR+KC
Sbjct: 1317 QPAGKSCLDKFDERYLEDCRHGEFTNRFYFDHDRKKC 1353
>Z77663-14|CAB01214.2| 568|Caenorhabditis elegans Hypothetical
protein F53F4.5 protein.
Length = 568
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 147 ILKIINCMYEMSH*MNHQLDRYPSAWAHIVLCADLTWAKE--PPDDFNVANQRLWSQHCR 320
I +II C+ M H L YP W + + A++ +A P + A Q +W+ R
Sbjct: 425 IAEIIGCLPPMKH----YLFFYPRFWMKLFMGANVPYAYRLVGPHAWEGAEQAIWTVSER 480
Query: 321 VSQVLQD 341
V + L++
Sbjct: 481 VKKPLKN 487
>AJ581300-1|CAE46113.1| 568|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 568
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 147 ILKIINCMYEMSH*MNHQLDRYPSAWAHIVLCADLTWAKE--PPDDFNVANQRLWSQHCR 320
I +II C+ M H L YP W + + A++ +A P + A Q +W+ R
Sbjct: 425 IAEIIGCLPPMKH----YLFFYPRFWMKLFMGANVPYAYRLVGPHAWEGAEQAIWTVSER 480
Query: 321 VSQVLQD 341
V + L++
Sbjct: 481 VKKPLKN 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,262,465
Number of Sequences: 27780
Number of extensions: 307994
Number of successful extensions: 759
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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