Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19f18
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z73911-7|CAA98142.2|  483|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AC098856-4|AAL27248.2|  261|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical
           protein F08H9.12 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +2

Query: 38  NEAKKMITYVVHGLNLFSLLIQNIVNFAALIGKFILLFLIYVSSAILETKNSIK 199
           N  K ++T       +F L +   +N   +   F+LLFL Y++S    ++N+++
Sbjct: 123 NSIKYLLTLKFSNSQIFLLNLVKKLNVVLISKDFLLLFLCYLNSIQYFSENNLQ 176


>Z73911-7|CAA98142.2|  483|Caenorhabditis elegans Hypothetical
           protein T12A7.2a protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 76  TKFIFIAHTEYCKLRCSYWQIYSTFSN 156
           TKFI   + EY KLR +YW+   ++ +
Sbjct: 371 TKFIGGDYWEYAKLRKTYWEAMESYED 397


>AC098856-4|AAL27248.2|  261|Caenorhabditis elegans Hypothetical
           protein Y37F4.1 protein.
          Length = 261

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 76  TKFIFIAHTEYCKLRCSYWQIYSTFSN 156
           TKFI + + EY +LR  YW    T+ +
Sbjct: 148 TKFIGVDYWEYARLRKIYWLSLETYDD 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,672,057
Number of Sequences: 27780
Number of extensions: 224428
Number of successful extensions: 609
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)