Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte19f18
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.59
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 25 0.78
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 25 0.78
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 25 0.78
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 25 0.78
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 25 0.78
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 25 0.78
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 24 1.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 7.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 7.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 7.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.3
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.0 bits (52), Expect = 0.59
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 445 PGRYSVVNANVYSCSPSSTC*SNDKVYF*YCYKCYSRCIYEFI 573
PG+ S A + S +P C +D+ CY CYS +F+
Sbjct: 1039 PGKSSGAAA-MASAAPMPACFDSDRERLYDCYVCYSPNDEDFV 1080
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 352 NFNSDNYSANNWKCVC 399
N+N NY+ NN+K +C
Sbjct: 88 NYNYSNYNNNNYKQLC 103
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 352 NFNSDNYSANNWKCVC 399
N+N NY+ NN+K +C
Sbjct: 88 NYNYSNYNNNNYKQLC 103
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 352 NFNSDNYSANNWKCVC 399
N+N NY+ NN+K +C
Sbjct: 88 NYNYSNYNNNNYKQLC 103
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 352 NFNSDNYSANNWKCVC 399
N+N NY+ NN+K +C
Sbjct: 88 NYNYSNYNNNNYKQLC 103
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 352 NFNSDNYSANNWKCVC 399
N+N NY+ NN+K +C
Sbjct: 88 NYNYSNYNNNNYKQLC 103
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.78
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 352 NFNSDNYSANNWKCVC 399
N+N NY+ NN+K +C
Sbjct: 88 NYNYSNYNNNNYKQLC 103
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/77 (20%), Positives = 33/77 (42%)
Frame = +2
Query: 212 IVYEDNFSTFAEDLPNCVCNFKDATVDHFLYLGRTIVSIYYDIYSRLXXXXXXXXXXIGN 391
I+ ++N + ED P + + FL+L +S+ +I + IGN
Sbjct: 2 ILSQNNLTDGKEDQPENTFSLLSVLLVGFLFLILIFLSVAGNILVCVAIYTDRGLRRIGN 61
Query: 392 VFVNLSEVLLIFSKCII 442
+F+ + +F C++
Sbjct: 62 LFLASLAIADLFVGCLV 78
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +1
Query: 352 NFNSDNYSANNWK 390
N+N++NY+ NN+K
Sbjct: 96 NYNNNNYNNNNYK 108
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +1
Query: 352 NFNSDNYSANNWK 390
N+N++NY+ NN+K
Sbjct: 96 NYNNNNYNNNNYK 108
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +1
Query: 352 NFNSDNYSANNWK 390
N+N++NY+ NN+K
Sbjct: 96 NYNNNNYNNNNYK 108
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +1
Query: 352 NFNSDNYSANNWK 390
N+N++NY+ NN+K
Sbjct: 96 NYNNNNYNNNNYK 108
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 82 FIFIAHTEYCKLRCSYW 132
F+F A EY + +YW
Sbjct: 314 FVFAALLEYAAVNYTYW 330
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +1
Query: 352 NFNSDNYSANNW 387
N+N++NY+ NN+
Sbjct: 97 NYNNNNYNNNNY 108
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +1
Query: 352 NFNSDNYSANNW 387
N+N++NY+ NN+
Sbjct: 97 NYNNNNYNNNNY 108
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +1
Query: 352 NFNSDNYSANNW 387
N+N++NY+ NN+
Sbjct: 332 NYNNNNYNNNNY 343
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,590
Number of Sequences: 438
Number of extensions: 3029
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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