Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19f17
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    25   1.8  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   4.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   4.1  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   5.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.4  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   7.1  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   7.1  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   7.1  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   7.1  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           23   9.4  

>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 181 LDCQYCQYEMVPYFRRISPIHLHRV 107
           L C+YC    VP++  + P H++RV
Sbjct: 491 LRCRYCS---VPHYEPLDPEHVYRV 512


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 439 PAVPPRLLRDTKP 401
           PA+PPR  RD+KP
Sbjct: 658 PALPPRADRDSKP 670


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 302 NTGSFPQEIRVSLVSSSRIEDASRTACWFN 213
           NTGS   +++ +  SSS  +++SR   W N
Sbjct: 89  NTGSSNTQLQAAASSSSSKKNSSRRNAWGN 118


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 383 IPLAYIWFCITKQPRWDCW 439
           +  AY++F + K P   CW
Sbjct: 221 VAYAYLFFAVGKLPSCSCW 239


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 603  LNGRFAFNIINGNRF 559
            L G+F F I NG RF
Sbjct: 1032 LEGQFMFQIFNGERF 1046


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 107 HSMQVNWTYSSKVWNHLVLTVLAI 178
           H +  NW    K+W+H     L +
Sbjct: 74  HGIVTNWDDMEKIWHHTFYNELRV 97


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 107 HSMQVNWTYSSKVWNHLVLTVLAI 178
           H +  NW    K+W+H     L +
Sbjct: 74  HGIVTNWDDMEKIWHHTFYNELRV 97


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 107 HSMQVNWTYSSKVWNHLVLTVLAI 178
           H +  NW    K+W+H     L +
Sbjct: 74  HGIVTNWDDMEKIWHHTFYNELRV 97


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +1

Query: 472 CISEIAIDLLQYALDQLTALLALINTGYLKPISVNDIECESPIEELERQKRDLQ 633
           C + +A     +A +   AL  L  TG  KPI+       +P  ELE  +  +Q
Sbjct: 72  CRTSLAPCSKLFAAEPRVALPKLSATGASKPIAEPKAASATPAPELELLRATIQ 125


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 107 HSMQVNWTYSSKVWNHLVLTVLAI 178
           H +  NW    K+W+H     L +
Sbjct: 74  HGIITNWDDMEKIWHHTFYNELRV 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,660
Number of Sequences: 2352
Number of extensions: 15584
Number of successful extensions: 49
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)